RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ZNF85Q03923 595 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 PRAMEF8Q5VWM4 474 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 PRAMEF7Q5VXH5 474 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 WFIKKN2Q8TEU8 576 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 CHST11Q9NPF2 352 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 HCFC2Q9Y5Z7 792 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ASXL3Q9C0F0 2248 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 SCN3AQ9NY46 2000 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 B4DGG1 531 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 H3BML4 177 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 TGOLN2O43493 480 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 NDUFS1P28331 727 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 BLVRBP30043 206 aaPredicted RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 HSD11B2P80365 405 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 CDK3Q00526 305 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ASTLQ6HA08 431 aaPredicted RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM64Q6YI46 380 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 DPY19L2P2Q6ZN68 376 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 LILRB2Q8N423 598 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ZFP62Q8NB50 900 aaPredicted RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 NICN1Q9BSH3 213 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ZDHHC5Q9C0B5 715 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 C1orf123Q9NWV4 160 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 DHCR7Q9UBM7 475 aaKnown RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ADAM29Q9UKF5 820 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 C17orf113A0A1B0GUU1 675 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 A8MXK9 166 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 APBB3O95704 486 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 GALP22466 123 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 PXNP49023 591 aaPredicted RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 REEP5Q00765 189 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 DMKNQ6E0U4 476 aaPredicted RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM225Q6GV28 225 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 C1orf87Q8N0U7 546 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 MRPL43Q8N983 215 aaKnown RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 OR5AP2Q8NGF4 316 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 TAAR8Q969N4 342 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 TPRP12270 2363 aaKnown RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 F5H5K5 113 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 CLRN1P58418 232 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 ZP2Q05996 745 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 ARHGAP19Q14CB8 494 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 FAM26DQ5JW98 314 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 FAM185AQ8N0U4 392 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 UBL7Q96S82 380 aaPredicted RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 SGPP1Q9BX95 441 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 HEXA-AS1Q9H8Q6 139 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 H3BNC9 293 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 HOXB2P14652 356 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 C19orf48Q6RUI8 117 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 TMPPEQ6ZT21 453 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 GVQW1Q8N7I0 195 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 HOXB13Q92826 284 aaPredicted RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 TSACCQ96A04 125 aaPredicted RBP12.04□□□□□ -0.48
COL2A1-201ENST00000337299 HHIPQ96QV1 700 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 SIGLEC7Q9Y286 467 aa12.04□□□□□ -0.48
COL2A1-201ENST00000337299 ALOX12BO75342 701 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 IGHA1P01876 353 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ABOP16442 354 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CCNOP22674 350 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CX3CR1P49238 355 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 RAB32Q13637 225 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 OGFOD3Q6PK18 319 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CD300LDQ6UXZ3 194 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF709Q8N972 641 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 PHYHIPLQ96FC7 376 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 NUDT22Q9BRQ3 303 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 SEC11CQ9BY50 192 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 SLC2A4RGQ9NR83 387 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 HS3ST2Q9Y278 367 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 NEUROG3Q9Y4Z2 214 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 RFLNBQ8N5W9 214 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CABLES2Q9BTV7 478 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 GNG13Q9P2W3 67 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ICKQ9UPZ9 632 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 MRPS28Q9Y2Q9 187 aaKnown RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 SPTA1P02549 2419 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ZDBF2Q9HCK1 2354 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 UTRNP46939 3433 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 METTL12A8MUP2 240 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CTAG2O75638 210 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 DFFBO76075 338 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 GPANK1O95872 356 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CD96P40200 585 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 GSK3AP49840 483 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 TLE1Q04724 770 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 SERINC2Q96SA4 455 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 C6orf106Q9H6K1 298 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 POLMQ9NP87 494 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 GSTZ1O43708 216 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 GPR75O95800 540 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 MMP7P09237 267 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms