RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 P2RY10O00398 339 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 GP1BBP13224 206 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 SCAND1P57086 179 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 GMFBP60983 142 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 PLCXD2Q0VAA5 305 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 SGCBQ16585 318 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 GLT8D1Q68CQ7 371 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 FDX2Q6P4F2 183 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 MRPS24Q96EL2 167 aaKnown RBP11.03□□□□□ -0.64
VPS33B-201ENST00000333371 PDE7BQ9NP56 450 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 CUTCQ9NTM9 273 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 CEP192Q8TEP8 1941 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 PHYHO14832 338 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 CYB5AP00167 134 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 MYF5P13349 255 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 ACTBP60709 375 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 HNRNPKP61978 463 aaKnown RBP eCLIP11.03□□□□□ -0.64
VPS33B-201ENST00000333371 ACTG1P63261 375 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 TAF13Q15543 124 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 C1orf140Q5VVS0 124 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 ELP2Q6IA86 826 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 C3orf33Q6P1S2 294 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 LANCL3Q6ZV70 420 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 RHOUQ7L0Q8 258 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 DCXRQ7Z4W1 244 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 NAXDQ8IW45 347 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-201ENST00000333371 ST8SIA2Q92186 375 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 FBXW5Q969U6 566 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF285Q96NJ3 590 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 TXNIPQ9H3M7 391 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 C1orf198Q9H425 327 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 CENPMQ9NSP4 180 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 CKLFQ9UBR5 152 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 VSIG4Q9Y279 399 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 NOP16Q9Y3C1 178 aaKnown RBP11.03□□□□□ -0.64
VPS33B-201ENST00000333371 OR5H14A6NHG9 310 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 RHPN2P1A8MT19 583 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 FAM25EA8MYX2 175 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.64
VPS33B-201ENST00000333371 SHISA8B8ZZ34 492 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 H3BUI4 141 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 HPP00738 406 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 HLA-AP01891 365 aaKnown RBP11.02□□□□□ -0.64
VPS33B-201ENST00000333371 CD2P06729 351 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 RPA2P15927 270 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 IGFBP3P17936 291 aaPredicted RBP11.02□□□□□ -0.64
VPS33B-201ENST00000333371 ABCD3P28288 659 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 CALCRP30988 508 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 LUMP51884 338 aaPredicted RBP11.02□□□□□ -0.64
VPS33B-201ENST00000333371 NSDHLQ15738 373 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 DMRTC1Q5HYR2 192 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 CADM4Q8NFZ8 388 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 OR52H1Q8NGJ2 320 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 OR6K3Q8NGY3 331 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 OR52N5Q8NH56 324 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 ADAMTS18Q8TE60 1221 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 NUDCD2Q8WVJ2 157 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 ARL5BQ96KC2 179 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 POTEKPQ9BYX7 375 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 UCK1Q9HA47 277 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 MED29Q9NX70 200 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 PLEKHA6Q9Y2H5 1048 aa11.02□□□□□ -0.64
VPS33B-201ENST00000333371 D6RAR5 112 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 PLPP3O14495 311 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 TSPAN2O60636 221 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 PMS2P2O95744 297 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 ROM1Q03395 351 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 ZNF273Q14593 569 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 HLA-DQA1Q5Y7H0 255 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 KCTD18Q6PI47 426 aaPredicted RBP11.02□□□□□ -0.65
VPS33B-201ENST00000333371 ADGRE4PQ86SQ3 457 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 TMEM229BQ8NBD8 167 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 OR10K1Q8NGX5 313 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 SPACA5Q96QH8 159 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 PDCD10Q9BUL8 212 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 G6PC2Q9NQR9 355 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 MED9Q9NWA0 146 aa11.02□□□□□ -0.65
VPS33B-201ENST00000333371 DMDP11532 3685 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 BLACEA4D250 179 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 TLCD2A6NGC4 264 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 KRBOX1C9JBD0 128 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 NPIPB7O75200 414 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 AVPR2P30518 371 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 SLC6A8P48029 635 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 ARRB1P49407 418 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-201ENST00000333371 ATP1B3P54709 279 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 BAMBIQ13145 260 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CDNFQ49AH0 187 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 ASB17Q8WXJ9 295 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 SHDQ96IW2 340 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 DPYSL5Q9BPU6 564 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 PTGES2Q9H7Z7 377 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 VSX1Q9NZR4 365 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-201ENST00000333371 MRTO4Q9UKD2 239 aaKnown RBP11.01□□□□□ -0.65
VPS33B-201ENST00000333371 FREM2Q5SZK8 3169 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 IGKV3D-11A0A0A0MRZ8 115 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 ALG1L2C9J202 215 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms