RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 COL4A2P08572 1712 aa21.21■□□□□ 0.99
TSKU-201ENST00000333090 EPOPA6NHQ4 379 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 C17orf51A8MQB3 221 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 F8W036 122 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 PGAM2P15259 253 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 HOXA1P49639 335 aaPredicted RBP21.2■□□□□ 0.99
TSKU-201ENST00000333090 BLOC1S1P78537 153 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 RAB11FIP2Q7L804 512 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 OR5AP2Q8NGF4 316 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 OR13C3Q8NGS6 347 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 SLC37A2Q8TED4 501 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 MITD1Q8WV92 249 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 CMBLQ96DG6 245 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 SLC7A5P2Q9GIP4 190 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 LRP12Q9Y561 859 aa21.2■□□□□ 0.99
TSKU-201ENST00000333090 OR6C76A6NM76 312 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 ZNF208O43345 1280 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 UTS2O95399 124 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 F12P00748 615 aaPredicted RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 AKR1C4P17516 323 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 IGFBP3P17936 291 aaPredicted RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 NTSR1P30989 418 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 EIF2B1Q14232 305 aaKnown RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 ACKR1Q16570 336 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 ZNF542PQ5EBM4 170 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 KCTD18Q6PI47 426 aaPredicted RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 FJX1Q86VR8 437 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 ARHGEF39Q8N4T4 335 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 ZSCAN1Q8NBB4 408 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 MRGPRFQ96AM1 343 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 TCEAL2Q9H3H9 227 aaPredicted RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 ZNF629Q9UEG4 869 aaPredicted RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 FREM3P0C091 2139 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 PRSS37A4D1T9 235 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 SRSF3P84103 164 aaKnown RBP21.2■□□□□ 0.98
TSKU-201ENST00000333090 TRAPPC6BQ86SZ2 158 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 ABHD6Q9BV23 337 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 MKL2Q9ULH7 1088 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 EMC9Q9Y3B6 208 aa21.2■□□□□ 0.98
TSKU-201ENST00000333090 C13orf42A0A1B0GVH6 325 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 C5orf51A6NDU8 294 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 STK17BO94768 372 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 HOXB2P14652 356 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 CTLA4P16410 223 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 CXCR1P25024 350 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 IGLV3-21P80748 117 aaPredicted RBP21.19■□□□□ 0.98
TSKU-201ENST00000333090 MARCH3Q86UD3 253 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 CATSPERDQ86XM0 798 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 PRR22Q8IZ63 422 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 CHST4Q8NCG5 386 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 FOXRED1Q96CU9 486 aaPredicted RBP21.19■□□□□ 0.98
TSKU-201ENST00000333090 ATPIF1Q9UII2 106 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 LDLRAD4O15165 306 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 INSM1Q01101 510 aaPredicted RBP21.19■□□□□ 0.98
TSKU-201ENST00000333090 TOMM34Q15785 309 aaPredicted RBP21.19■□□□□ 0.98
TSKU-201ENST00000333090 SPAG16Q8N0X2 631 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 ARMC10Q8N2F6 343 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 ZNF321PQ8N8H1 164 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 OR4D6Q8NGJ1 314 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 C8orf44Q96CB5 159 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 ADOQ96SZ5 270 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 PRODH2Q9UF12 536 aa21.19■□□□□ 0.98
TSKU-201ENST00000333090 ZNF107Q9UII5 783 aaPredicted RBP21.19■□□□□ 0.98
TSKU-201ENST00000333090 ERCC1P07992 297 aaPredicted RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 CELA2BP08218 269 aaPredicted RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 HLA-GP17693 338 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 FSTP19883 344 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 RAB13P51153 203 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 ROM1Q03395 351 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 H3F3CQ6NXT2 135 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 ADAD2Q8NCV1 583 aaKnown RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 OR4K17Q8NGC6 315 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 NUDCD2Q8WVJ2 157 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 PIK3IP1Q96FE7 263 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 RTN4RQ9BZR6 473 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 NXF5Q9H1B4 397 aaKnown RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 A0A1W2PQF6 199 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 HCRTR2O43614 444 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 LMX1BO60663 402 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 NUDT14O95848 222 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 HNRNPA2B1P22626 353 aaKnown RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 B2MP61769 119 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 PLEKHN1Q494U1 663 aaPredicted RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 ARMC6Q6NXE6 501 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 DCUN1D4Q92564 292 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 TLNRD1Q9H1K6 362 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 TMEM231Q9H6L2 316 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 CHMP1AQ9HD42 196 aaPredicted RBP21.18■□□□□ 0.98
TSKU-201ENST00000333090 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 SLC2A8Q9NY64 477 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 HHLA2Q9UM44 414 aa21.18■□□□□ 0.98
TSKU-201ENST00000333090 A0A0A6YYH2 397 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 A6NJ64 397 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 IL2RAP01589 272 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 BGLAPP02818 100 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 ZNF813Q6ZN06 617 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 PHOSPHO2Q8TCD6 241 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 FAM46BQ96A09 425 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 SELENOIQ9C0D9 397 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 SEMA6CQ9H3T2 930 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms