RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 BTN3A2P78410 334 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 PHF19Q5T6S3 580 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 LINC00114Q6XXX2 140 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 TMPPEQ6ZT21 453 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 CDC20BQ86Y33 519 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 OR1J1Q8NGS3 322 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 SLC5A7Q9GZV3 580 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 PRDM13Q9H4Q3 707 aa21.92■■□□□ 1.1
SOX1-201ENST00000330949 APOBEC3BQ9UH17 382 aaKnown RBP21.92■■□□□ 1.1
SOX1-201ENST00000330949 SPINT1O43278 529 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 PLGP00747 810 aaPredicted RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 SULT1A1P50225 295 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 SLC25A1P53007 311 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 DMRTC2Q8IXT2 367 aaPredicted RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 CDRT4Q8N9R6 151 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 PLPP7Q8NBV4 271 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 S100PBPQ96BU1 408 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 DCBLD2Q96PD2 775 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 C19orf53Q9UNZ5 99 aaPredicted RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 TERTO14746 1132 aaKnown RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 TAS2R31P59538 309 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 KIAA0141Q14154 515 aaPredicted RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 TRMT12Q53H54 448 aaKnown RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 PRSS35Q8N3Z0 413 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 ADAD2Q8NCV1 583 aaKnown RBP21.91■■□□□ 1.1
SOX1-201ENST00000330949 C3orf49Q96BT1 292 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 SPEGQ15772 3267 aa21.91■■□□□ 1.1
SOX1-201ENST00000330949 HSPB2A8KAH6 182 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 PRRT4C9JH25 899 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 DAOP14920 347 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 VIPR2P41587 438 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 EIF2B1Q14232 305 aaKnown RBP21.9■■□□□ 1.1
SOX1-201ENST00000330949 HSPB2Q16082 182 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 ULK3Q6PHR2 472 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 AKR7LQ8NHP1 331 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 ARRDC3Q96B67 414 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 MEGF10Q96KG7 1140 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 STACQ99469 402 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 TMEM235A6NFC5 223 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 BRINP1O60477 761 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 MAS1LP35410 378 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 RAB28P51157 221 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 EGR3Q06889 387 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 Q6ZRG5 221 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 ADGRE4PQ86SQ3 457 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 RCBTB1Q8NDN9 531 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 MARS2Q96GW9 593 aaKnown RBP21.9■■□□□ 1.1
SOX1-201ENST00000330949 C4orf45Q96LM5 186 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 DNAJB11Q9UBS4 358 aa21.9■■□□□ 1.1
SOX1-201ENST00000330949 ZNF346Q9UL40 294 aaKnown RBP21.9■■□□□ 1.1
SOX1-201ENST00000330949 TBC1D3DA0A087WVF3 549 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 TBC1D3IA0A087WXS9 549 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 TBC1D3LB9A6J9 549 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 IFNA10P01566 189 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 OR8U9P0C7N5 309 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 CDKN2AP42771 156 aaKnown RBP21.89■■□□□ 1.1
SOX1-201ENST00000330949 SPCS3P61009 180 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 TBC1D3CQ6IPX1 549 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 ANKRD33Q7Z3H0 272 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 TBC1D3Q8IZP1 549 aaPredicted RBP21.89■■□□□ 1.1
SOX1-201ENST00000330949 OR8U1Q8NH10 309 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 SSX3Q99909 188 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 NRSN2Q9GZP1 204 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 SCN3AQ9NY46 2000 aa21.89■■□□□ 1.1
SOX1-201ENST00000330949 URADA6NGE7 173 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 FGF19O95750 216 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 PET100P0DJ07 73 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 SLC2A1P11166 492 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 ACAA2P42765 397 aaKnown RBP21.89■■□□□ 1.09
SOX1-201ENST00000330949 MNX1P50219 401 aaPredicted RBP21.89■■□□□ 1.09
SOX1-201ENST00000330949 PRPS1P60891 318 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 HIST2H3AQ71DI3 136 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 LYPD6BQ8NI32 183 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 FAM174AQ8TBP5 190 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 TSSK2Q96PF2 358 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 OR5AC2Q9NZP5 309 aa21.89■■□□□ 1.09
SOX1-201ENST00000330949 PRAMEF26H0Y7S4 382 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 CSTBP04080 98 aaKnown RBP21.88■■□□□ 1.09
SOX1-201ENST00000330949 ARG1P05089 322 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 RAB1AP62820 205 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 DHCR24Q15392 516 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 GXYLT1Q4G148 440 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 LBHQ53QV2 105 aaPredicted RBP21.88■■□□□ 1.09
SOX1-201ENST00000330949 ZNF563Q8TA94 476 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 OR8D1Q8WZ84 308 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 HHIPL1Q96JK4 782 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 C20orf24Q9BUV8 137 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 LMAN2LQ9H0V9 348 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 CKLFQ9UBR5 152 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 TMEM184BQ9Y519 407 aaPredicted RBP21.88■■□□□ 1.09
SOX1-201ENST00000330949 KNL1Q8NG31 2342 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 IFITM10A6NMD0 228 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 DCTN6O00399 190 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 PCCBP05166 539 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 LSSP48449 732 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 EXOSC6Q5RKV6 272 aaKnown RBP21.88■■□□□ 1.09
SOX1-201ENST00000330949 GLYATL3Q5SZD4 288 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 RPL7L1Q6DKI1 246 aaKnown RBP21.88■■□□□ 1.09
SOX1-201ENST00000330949 OR4N5Q8IXE1 308 aa21.88■■□□□ 1.09
SOX1-201ENST00000330949 COMMD1Q8N668 190 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms