RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LOC107986453A0A1B0GWG9 222 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 CYTIPO60759 359 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 MT-CO2P00403 227 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 PPICP45877 212 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 DLX5P56178 289 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 PDLIM3Q53GG5 364 aaPredicted RBP9.25□□□□□ -0.93
CHD3-201ENST00000330494 PDZD11Q5EBL8 140 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 LIMS2Q7Z4I7 341 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 MORN4Q8NDC4 146 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 OR2A14Q96R47 310 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 ABHD6Q9BV23 337 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 FZR1Q9UM11 496 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 MYOFQ9NZM1 2061 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 TRGV8A0A0C4DH27 118 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SLC22A23A1A5C7 686 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 C4orf47A7E2U8 309 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 LMO7DNF2Z398 122 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 ADAM23O75077 832 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SNRPGP62308 76 aaKnown RBP9.25□□□□□ -0.93
CHD3-201ENST00000330494 RAE1P78406 368 aaKnown RBP9.25□□□□□ -0.93
CHD3-201ENST00000330494 TCTN1Q2MV58 587 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SLC35D3Q5M8T2 416 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 RTL6Q6ICC9 239 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 KIRREL2Q6UWL6 708 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 RBMXL1Q96E39 390 aaKnown RBP9.25□□□□□ -0.93
CHD3-201ENST00000330494 C1orf123Q9NWV4 160 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 PIGBOS1A0A0B4J2F0 54 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 TCRBV5S2A0A599 114 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SIRPB1O00241 398 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 TBXA2RP21731 343 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 GDPD3Q7L5L3 318 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 PTOV1Q86YD1 416 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 OR52H1Q8NGJ2 320 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 OR51H1Q8NH63 302 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 LINC00615Q96LM1 132 aaPredicted RBP9.25□□□□□ -0.93
CHD3-201ENST00000330494 LAT2Q9GZY6 243 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 HIF1ANQ9NWT6 349 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 PRRG2O14669 202 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 NAGAP17050 411 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 PPT1P50897 306 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 F2RL1P55085 397 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 MFGE8Q08431 387 aaPredicted RBP9.25□□□□□ -0.93
CHD3-201ENST00000330494 FOXF1Q12946 379 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 OR51S1Q8NGJ8 323 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 REEP6Q96HR9 211 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 KCNJ15Q99712 375 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 A0A1W2PR80 420 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SMIM18P0DKX4 95 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 CD1EP15812 388 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 ELK1P19419 428 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 RAD52P43351 418 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 ISL1P61371 349 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 AKR1C1Q04828 323 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 IHHQ14623 411 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 DHRS4L2Q6PKH6 230 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SH2D5Q6ZV89 423 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 ADGRE4PQ86SQ3 457 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 FJX1Q86VR8 437 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 MRGPRX3Q96LB0 322 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 GNRHR2Q96P88 292 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SLC19A3Q9BZV2 496 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 SLC25A31Q9H0C2 315 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 GPR84Q9NQS5 396 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 ZFP57Q9NU63 452 aa9.25□□□□□ -0.93
CHD3-201ENST00000330494 NOVA1P51513 510 aaKnown RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 GP2P55259 537 aaKnown RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 OPCMLQ14982 345 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 ATPAF1Q5TC12 328 aaPredicted RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 ANKRD9Q96BM1 317 aaPredicted RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 C12orf57Q99622 126 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 COL24A1Q17RW2 1714 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 CISD3P0C7P0 127 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 B4GALT1P15291 398 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 UBE2KP61086 200 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 C21orf62-AS1Q17RA5 79 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 GLCCI1Q86VQ1 547 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 NUDT9Q9BW91 350 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 FABP7O15540 132 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 TMEM41BQ5BJD5 291 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 LILRA6Q6PI73 481 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 ZNF793Q6ZN11 406 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 OVCH1Q7RTY7 1134 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 OR51F2Q8NH61 342 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 FAM213BQ8TBF2 198 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 ZNF707Q96C28 371 aaPredicted RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 RAB22AQ9UL26 194 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 KLK4Q9Y5K2 254 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 GPR171O14626 319 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 FUCA1P04066 466 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 G0S2P27469 103 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 PLA2G7Q13093 441 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 AKR7LQ8NHP1 331 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 MEX3AA1L020 520 aaKnown RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 SDCBPO00560 298 aaPredicted RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 AQP7O14520 342 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 ADAM10O14672 748 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 CTSVO60911 334 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 SCAF4O95104 1147 aaKnown RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 PPP3CBP16298 524 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms