RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 C4orf36Q96KX1 117 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 MCHR1Q99705 422 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ALG12Q9BV10 488 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 MRPL13Q9BYD1 178 aaKnown RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 POLR2J2Q9GZM3 115 aaKnown RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 POLR2J3Q9H1A7 115 aaKnown RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 VCX3AQ9NNX9 186 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 CTPS2Q9NRF8 586 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ZNF701Q9NV72 531 aaPredicted RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 FAM215AQ9Y5M1 114 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 DOCK7Q96N67 2140 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 NCOA6Q14686 2063 aaPredicted RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 LOC100509620A0A075B734 347 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMED7-TICAM2A0A0A6YYA0 188 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 A0A0J9YW62 118 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 A0A1B0GWA3 101 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TUBAL3A6NHL2 446 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SH2D7A6NKC9 451 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 E9PLN8 166 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 J3QKU1 62 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 NPIPB7O75200 414 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 PRSS23O95084 383 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 NXPH2O95156 264 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ZNF682O95780 498 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ABHD16AO95870 558 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SEMG1P04279 462 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TNFRSF1BP20333 461 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ACVR2AP27037 513 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SHC1P29353 583 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 OR1E2P47887 323 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TGM4P49221 684 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMEM176BQ3YBM2 270 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SYT14P1Q58G82 188 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ENTPD8Q5MY95 495 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SLC46A3Q7Z3Q1 461 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 YTHDF3Q7Z739 585 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 DHFR2Q86XF0 187 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 CADM2Q8N3J6 435 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 GEMIN6Q8WXD5 167 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 POP5Q969H6 163 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 KLHL15Q96M94 604 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 VKORC1Q9BQB6 163 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 C7orf50Q9BRJ6 194 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 AMBRA1Q9C0C7 1298 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 CALHM2Q9HA72 323 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMEM27Q9HBJ8 222 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ERRFI1Q9UJM3 462 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMED7Q9Y3B3 224 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SPIN1Q9Y657 262 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 KIAA1549Q9HCM3 1950 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 INTS1Q8N201 2190 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 A0A087WUJ7 227 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TRGV8A0A0C4DH27 118 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TEX13CA0A0J9YWL9 993 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TCRBV5S2A0A599 114 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMEM72A0PK05 275 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 PAGE4O60829 102 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 THY1P04216 161 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 PNMTP11086 282 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ATP6V1B2P21281 511 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 EEF1B2P24534 225 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 CXCR1P25024 350 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 RAB9AP51151 201 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 CDH12P55289 794 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 SRYQ05066 204 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 FLOT2Q14254 428 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 C5orf64Q2M2E5 130 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ANKRD55Q3KP44 614 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ACSF3Q4G176 576 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 IQCCQ4KMZ1 466 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ALG10BQ5I7T1 473 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 NSUN5P2Q63ZY6 315 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ZNF585AQ6P3V2 769 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMEM108Q6UXF1 575 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TMEM182Q6ZP80 229 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 SEM1Q6ZVN7 128 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TSEN54Q7Z6J9 526 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 CENPVQ7Z7K6 275 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 LRRC75A-AS1Q8N1F1 130 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 OR10D3Q8NH80 312 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 VANGL1Q8TAA9 524 aaPredicted RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 CCDC124Q96CT7 223 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 PYURFQ96I23 114 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 LRR1Q96L50 414 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TTYH2Q9BSA4 534 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ZNF426Q9BUY5 554 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 KATNB1Q9BVA0 655 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 HIPK2Q9H2X6 1198 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TOR3AQ9H497 397 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 ALKBH4Q9NXW9 302 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 A4GNTQ9UNA3 340 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 POMPQ9Y244 141 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 TRAPPC4Q9Y296 219 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 MEMO1Q9Y316 297 aa7.3□□□□□ -1.24
CHD6-201ENST00000309279 HDGFL3Q9Y3E1 203 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms