RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 OR4K13Q8NH42 304 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 BTBD10Q9BSF8 475 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 BEX2Q9BXY8 128 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 SHARPINQ9H0F6 387 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 RACGAP1Q9H0H5 632 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 CDH10Q9Y6N8 788 aa22.55■■□□□ 1.2
CDKN2A-201ENST00000304494 DCTN6O00399 190 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 RP2O75695 350 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 GAAP10253 952 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 FAM209AQ5JX71 171 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 GJC3Q8NFK1 279 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 OR1F12Q8NHA8 337 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 EGLN3Q9H6Z9 239 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 REEP1Q9H902 201 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 SAP30LQ9HAJ7 183 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 RPRD1BQ9NQG5 326 aaKnown RBP22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 GRIP1Q9Y3R0 1128 aa22.54■■□□□ 1.2
CDKN2A-201ENST00000304494 JMJD1CQ15652 2540 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 IGHV1-69-2A0A0G2JMI3 117 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 OR6C6A6NF89 314 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 PPIHO43447 177 aaKnown RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 FAM157CP0CG43 387 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 IL2RGP31785 369 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 CRYBB2P43320 205 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 TSTQ16762 297 aaKnown RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 CCDC92Q53HC0 331 aaPredicted RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 OTPQ5XKR4 325 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 OR2T5Q6IEZ7 315 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 ZNF770Q6IQ21 691 aaPredicted RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 TRPM8Q7Z2W7 1104 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 ZBTB46Q86UZ6 589 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 LINC01356Q8N9X3 169 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 OR52E2Q8NGJ4 325 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 OR2T29Q8NH02 315 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 BCAS4Q8TDM0 211 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 GTF3AQ92664 365 aaKnown RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 CCDC124Q96CT7 223 aaKnown RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 DCLRE1CQ96SD1 692 aaKnown RBP22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 SOX7Q9BT81 388 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 HDHD2Q9H0R4 259 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 ZDHHC8Q9ULC8 765 aa22.53■■□□□ 1.2
CDKN2A-201ENST00000304494 J3QW42 95 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 RER1O15258 196 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 SPRY3O43610 288 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 GASTP01350 101 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 RAP2AP10114 183 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 SLC36A3Q495N2 470 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 CLEC12AQ5QGZ9 265 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 SLC35F1Q5T1Q4 408 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 RASSF6Q6ZTQ3 369 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 AQP11Q8NBQ7 271 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 SDR9C7Q8NEX9 313 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 SLC26A10Q8NG04 563 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 C1orf159Q96HA4 380 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 DIRC2Q96SL1 478 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 THTPAQ9BU02 230 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 IL20Q9NYY1 176 aa22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 SAMHD1Q9Y3Z3 626 aaKnown RBP22.52■■□□□ 1.2
CDKN2A-201ENST00000304494 TIMM8AO60220 97 aaPredicted RBP22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 CDC14BO60729 498 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 GPANK1O95872 356 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 IGHV1-46P01743 117 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 HNF1AP20823 631 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 IGFBP5P24593 272 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 RGS6P49758 472 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 HIST1H3AP68431 136 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 TRAP1Q12931 704 aaKnown RBP22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 CCNIQ14094 377 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 MEP1BQ16820 701 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 MICAQ29983 383 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 TMEM255AQ5JRV8 349 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 HIST2H3PS2Q5TEC6 136 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 HIST2H3AQ71DI3 136 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 CLPTM1LQ96KA5 538 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 EGLN1Q9GZT9 426 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 LHFPL6Q9Y693 200 aa22.51■■□□□ 1.19
CDKN2A-201ENST00000304494 OR6C68A6NDL8 312 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 BHLHE40O14503 412 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 ACOT8O14734 319 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 ADH4P08319 380 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 CDH15P55291 814 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 COX10Q12887 443 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 PSG7Q13046 419 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 GK3PQ14409 553 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 HFEQ30201 348 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 USP51Q70EK9 711 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 SLC7A6Q92536 515 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 ELMOD3Q96FG2 381 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 COQ7Q99807 217 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 CDADC1Q9BWV3 514 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 TBC1D23Q9NUY8 699 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 KLHL21Q9UJP4 597 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 U3KQV3 271 aa22.5■■□□□ 1.19
CDKN2A-201ENST00000304494 ZSCAN5BA6NJL1 495 aa22.49■■□□□ 1.19
CDKN2A-201ENST00000304494 HLA-DQA2P01906 255 aa22.49■■□□□ 1.19
CDKN2A-201ENST00000304494 TFP02787 698 aa22.49■■□□□ 1.19
CDKN2A-201ENST00000304494 HOXB6P17509 224 aaKnown RBP22.49■■□□□ 1.19
CDKN2A-201ENST00000304494 FAM120AOSQ5T036 256 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms