RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 OR2T1O43869 369 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 ARHGDIBP52566 201 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 MFGE8Q08431 387 aaPredicted RBP19.61■□□□□ 0.73
TPM4-201ENST00000300933 ZNF248Q8NDW4 579 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 STK35Q8TDR2 534 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 PRMT8Q9NR22 394 aaPredicted RBP19.61■□□□□ 0.73
TPM4-201ENST00000300933 FBXL3Q9UKT7 428 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 TNRC6BQ9UPQ9 1833 aaKnown RBP19.61■□□□□ 0.73
TPM4-201ENST00000300933 FXYD6-FXYD2A0A087WZ82 144 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 A0A1B0GUH1 482 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 GSTZ1O43708 216 aaPredicted RBP19.61■□□□□ 0.73
TPM4-201ENST00000300933 SFTPDP35247 375 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 EIF2B1Q14232 305 aaKnown RBP19.61■□□□□ 0.73
TPM4-201ENST00000300933 LINC00303Q3SY05 128 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 TMEM205Q6UW68 189 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 FXYD6Q9H0Q3 95 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 KCNK15Q9H427 330 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 PCDHGA5Q9Y5G8 931 aa19.61■□□□□ 0.73
TPM4-201ENST00000300933 EIF1AYO14602 144 aaKnown RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 PRAF2O60831 178 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 RP2O75695 350 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 TMIGD3P0DMS9 266 aaPredicted RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 S100A11P31949 105 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 EIF1AXP47813 144 aaKnown RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 GLDNQ6ZMI3 551 aaPredicted RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 TMPRSS12Q86WS5 348 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 BVESQ8NE79 360 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 ABHD6Q9BV23 337 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 ZCCHC4Q9H5U6 513 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 PCDHGA9Q9Y5G4 932 aaKnown RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 ASPMQ8IZT6 3477 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 PMS2P1A4D2B8 440 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 NPIPA5E9PKD4 350 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 ITGA10O75578 1167 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 ZNF41P51814 821 aaPredicted RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 UBE2MP61081 183 aaKnown RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 H1FNTQ75WM6 255 aaPredicted RBP19.6■□□□□ 0.73
TPM4-201ENST00000300933 KRT77Q7Z794 578 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 ZNF454Q8N9F8 522 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 POC1BQ8TC44 478 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 SLC25A38Q96DW6 304 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 GINS4Q9BRT9 223 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 NPIPA1Q9UND3 350 aa19.6■□□□□ 0.73
TPM4-201ENST00000300933 CREBL2O60519 120 aaPredicted RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 MYBPHQ13203 477 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 HYAL4Q2M3T9 481 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 TMUB2Q71RG4 321 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 TSEN15Q8WW01 171 aaKnown RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 ST8SIA1Q92185 356 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 OR5V1Q9UGF6 321 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 UMODP07911 640 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 GIPP09681 153 aaPredicted RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 DCTDP32321 178 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 SLC17A1Q14916 467 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 UBE2NLQ5JXB2 153 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 MISPQ8IVT2 679 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 SCARB1Q8WTV0 552 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 OR8B4Q96RC9 309 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 ZNF416Q9BWM5 594 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 SAV1Q9H4B6 383 aaPredicted RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 VSX1Q9NZR4 365 aaPredicted RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 EMC3Q9P0I2 261 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 WIF1Q9Y5W5 379 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 TMEM14AQ9Y6G1 99 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 TTC28Q96AY4 2481 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 AIPO00170 330 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 CD1AP06126 327 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 APOBEC1P41238 236 aaKnown RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 SEC61A1P61619 476 aaKnown RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 EGR3Q06889 387 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 LINC00518Q8N0U6 118 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 C4orf45Q96LM5 186 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 COMMD4Q9H0A8 199 aa19.59■□□□□ 0.73
TPM4-201ENST00000300933 GPN3Q9UHW5 284 aaPredicted RBP19.59■□□□□ 0.73
TPM4-201ENST00000300933 ZNF814B7Z6K7 855 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 NDUFA2O43678 99 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 RAMP1O60894 148 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 FGF2P09038 288 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 DPP4P27487 766 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 BIDP55957 195 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 RAP2BP61225 183 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 HSF1Q00613 529 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 PCOLCEQ15113 449 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 PLPPR5Q32ZL2 321 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 SLC18B1Q6NT16 456 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 MAMSTRQ6ZN01 415 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 AGBL5Q8NDL9 886 aa19.58■□□□□ 0.73
TPM4-201ENST00000300933 MTRF1O75570 445 aaKnown RBP19.58■□□□□ 0.72
TPM4-201ENST00000300933 SPDEFO95238 335 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 KLK3P07288 261 aaPredicted RBP19.58■□□□□ 0.72
TPM4-201ENST00000300933 FGF5P12034 268 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 RPS18P62269 152 aaKnown RBP19.58■□□□□ 0.72
TPM4-201ENST00000300933 DHODHQ02127 395 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 CARD17Q5XLA6 110 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 GLB1L2Q8IW92 636 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 DCBLD2Q96PD2 775 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 OR5B2Q96R09 309 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 GAL3ST1Q99999 423 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 PCDHB16Q9NRJ7 776 aa19.58■□□□□ 0.72
TPM4-201ENST00000300933 KLHL9Q9P2J3 617 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms