RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CMKLR1Q99788 373 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 TMPRSS13Q9BYE2 586 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM138Q9NPI0 162 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 GOSR2O14653 212 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 ARPC5O15511 151 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 OR2A4O95047 310 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 IL5P05113 134 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 CSF1P09603 554 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF35P13682 527 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 RAP2BP61225 183 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 TDGQ13569 410 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 MOGAT2Q3SYC2 334 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 B3GNTL1Q67FW5 361 aaPredicted RBP11.55□□□□□ -0.56
HIF3A-204ENST00000300862 TMPRSS9Q7Z410 1059 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 BVESQ8NE79 360 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 OR13C3Q8NGS6 347 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 STT3BQ8TCJ2 826 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 SLC25A28Q96A46 364 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF501Q96CX3 271 aaPredicted RBP11.55□□□□□ -0.56
HIF3A-204ENST00000300862 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 UTP23Q9BRU9 249 aaKnown RBP11.55□□□□□ -0.56
HIF3A-204ENST00000300862 A0A1W2PPC1 479 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 FTCDNL1E5RQL4 147 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 CSN2P05814 226 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 HTR2CP28335 458 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 POU3F1Q03052 451 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-204ENST00000300862 FAM166AQ6J272 317 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 STEAP1BQ6NZ63 245 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 ATRAIDQ6UW56 229 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 COX15Q7KZN9 410 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF248Q8NDW4 579 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 OR10Z1Q8NGY1 313 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 SCARB1Q8WTV0 552 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 SLC41A2Q96JW4 573 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 EXO5Q9H790 373 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 FBXL2Q9UKC9 423 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 FXYD6-FXYD2A0A087WZ82 144 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 LOC107986453A0A1B0GWG9 222 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 P2RY10O00398 339 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 MBTPS2O43462 519 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 NUDT21O43809 227 aaKnown RBP11.54□□□□□ -0.56
HIF3A-204ENST00000300862 TIAF1O95411 115 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 CD2P06729 351 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 AKAIN1P0CW23 69 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF823P16415 610 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 S100A11P31949 105 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 DNASE1L1P49184 302 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 TMED4Q7Z7H5 227 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 CLEC1AQ8NC01 280 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 SLC26A10Q8NG04 563 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 OR1S1Q8NH92 325 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 TNFAIP8L1Q8WVP5 186 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 UQCC2Q9BRT2 126 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 TINAGL1Q9GZM7 467 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-204ENST00000300862 FXYD6Q9H0Q3 95 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-204ENST00000300862 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 GPR160Q9UJ42 338 aa11.54□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM269A0A1B0GVZ9 245 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 UBE2QL1A1L167 161 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 NPIPA5E9PKD4 350 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 RP2O75695 350 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 SEC61A1P61619 476 aaKnown RBP11.53□□□□□ -0.56
HIF3A-204ENST00000300862 GLT8D1Q68CQ7 371 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 TMUB2Q71RG4 321 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 GABRG1Q8N1C3 465 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 GALNT16Q8N428 558 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 APCDD1LQ8NCL9 501 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 OR6N1Q8NGY5 312 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 SEH1LQ96EE3 360 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM185BQ9H7F4 350 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 IFT46Q9NQC8 304 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 OPN4Q9UHM6 478 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 NPIPA1Q9UND3 350 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 HSPB2A8KAH6 182 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 OR2T1O43869 369 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 ALOX12BO75342 701 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 GABRA1P14867 456 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 GLB1P16278 677 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 BTF3P20290 206 aaKnown RBP11.53□□□□□ -0.56
HIF3A-204ENST00000300862 CRABP1P29762 137 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 CALCRP30988 508 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 MECP2P51608 486 aaKnown RBP11.53□□□□□ -0.56
HIF3A-204ENST00000300862 DLX5P56178 289 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 SCAND1P57086 179 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 FOXF1Q12946 379 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 INPP5JQ15735 1006 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-204ENST00000300862 HSPB2Q16082 182 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 FAM69BQ5VUD6 431 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 CADM4Q8NFZ8 388 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 C5orf34Q96MH7 638 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 TTYH1Q9H313 450 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-204ENST00000300862 POFUT1Q9H488 388 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 TAS2R8Q9NYW2 309 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 GLS2Q9UI32 602 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 OR52A1Q9UKL2 312 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms