RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MYO10Q9HD67 2058 aa3.9□□□□□ -1.78
CD44-202ENST00000278385 REV3LO60673 3130 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 KIR2DS5A0A0G2JLQ3 304 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 LRIT2A6NDA9 550 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 hCG_2039718K7EN88 272 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 K7EQS6 105 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 KIR2DS3K7RE56 304 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 SULT1C2O00338 296 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 ADAM10O14672 748 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 TIMM23O14925 209 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 PPP1R2P9O14990 202 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 RGS16O15492 202 aaPredicted RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 C1orf105O95561 183 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 IGSF6O95976 241 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 NGFRP08138 427 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 HBQ1P09105 142 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 PAEPP09466 180 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 NQO1P15559 274 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 FASP25445 335 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 CD79BP40259 229 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 VHLP40337 213 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 MAGEA3P43357 314 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 RAP1GDS1P52306 607 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 SPCS3P61009 180 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 RPS18P62269 152 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 LSM6P62312 80 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 MRPS22P82650 360 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 CKAP4Q07065 602 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 RGS1Q08116 209 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 ST3GAL3Q11203 375 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 GABRA6Q16445 453 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 ATP6V1FQ16864 119 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 PRTGQ2VWP7 1150 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 TMEM52BQ4KMG9 183 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 FGD3Q5JSP0 725 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 RBM48Q5RL73 367 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 DCAF12Q5T6F0 453 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 HACD2Q6Y1H2 254 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 USP43Q70EL4 1123 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 AHSA2Q719I0 299 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 SMIM15Q7Z3B0 74 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 HSD11B1LQ7Z5J1 315 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 PIGZQ86VD9 579 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 BBS7Q8IWZ6 715 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 EID3Q8N140 333 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 TMEM251Q8N6I4 163 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 IQCF1Q8N6M8 205 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 OR4D9Q8NGE8 314 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 OR5AK3PQ8NH89 298 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 RPLP0P6Q8NHW5 317 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 MAGEC3Q8TD91 643 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 RNASEH2CQ8TDP1 164 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 AENQ8WTP8 325 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 SETD7Q8WTS6 366 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 NELFBQ8WX92 580 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 AP3S1Q92572 193 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 ABTB1Q969K4 478 aaPredicted RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 MRPL24Q96A35 216 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 DGCR14Q96DF8 476 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 SGTBQ96EQ0 304 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 WDR34Q96EX3 536 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 ITCHQ96J02 903 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 HSFY1Q96LI6 401 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 CCDC42Q96M95 316 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 CPXM1Q96SM3 734 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 FGF20Q9NP95 211 aaPredicted RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 A4GALTQ9NPC4 353 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 BATF3Q9NR55 127 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 NLE1Q9NVX2 485 aaPredicted RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 DEC1Q9P2X7 70 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 CYB5R1Q9UHQ9 305 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 ZDHHC2Q9UIJ5 367 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 MMP17Q9ULZ9 603 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 EXOSC1Q9Y3B2 195 aaKnown RBP3.9□□□□□ -1.79
CD44-202ENST00000278385 C2orf16Q68DN1 1984 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 CITO14578 2027 aa3.9□□□□□ -1.79
CD44-202ENST00000278385 NOTCH4Q99466 2003 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 GNG14A0A1W2PPG7 69 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ZNF487B1APH4 448 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 K7EN84 100 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 PLPP3O14495 311 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 TM9SF1O15321 606 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ANXA9O76027 345 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 UTS2O95399 124 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ORM1P02763 201 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ATP1B1P05026 303 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 IGKV2-30P06310 120 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 RHOCP08134 193 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ABOP16442 354 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 MGMTP16455 207 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 CHRNB2P17787 502 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 HOXD3P31249 432 aaPredicted RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 TGFBR2P37173 567 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 DDOSTP39656 456 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms