RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 KNL1Q8NG31 2342 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 PIAS2O75928 621 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 NME1P15531 152 aaKnown RBP15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 UBE2KP61086 200 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 ISL1P61371 349 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 FOXC1Q12948 553 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 SHBQ15464 509 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 LSRQ86X29 649 aaPredicted RBP15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 TMEM217Q8N7C4 229 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 ATF6BQ99941 703 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 GABARAPL1Q9H0R8 117 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 MED29Q9NX70 200 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 TAS2R5Q9NYW4 299 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 ZC3H12DA2A288 527 aaKnown RBP15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 FITM1A5D6W6 292 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 SSX2Q16385 188 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 KIAA1958Q8N8K9 716 aa15.33■□□□□ 0.04
CROCCP3-201ENST00000263511 DFFBO76075 338 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 EGR3Q06889 387 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 EIF3IQ13347 325 aaKnown RBP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 NAA40Q86UY6 237 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 SPACA9Q96E40 222 aaPredicted RBP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 OR2A14Q96R47 310 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 C20orf85Q9H1P6 137 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ARID1BQ8NFD5 2236 aaPredicted RBP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 HSPB2A8KAH6 182 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 HRO43593 1189 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 GLRA1P23415 457 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 TRA2AQ13595 282 aaKnown RBP eCLIP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 HABP2Q14520 560 aaPredicted RBP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 HSPB2Q16082 182 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ALKAL2Q6UX46 152 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ZFP82Q8N141 532 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 SYS1Q8N2H4 156 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 SVBPQ8N300 66 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 OR2AE1Q8NHA4 323 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 CMTM2Q8TAZ6 248 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 C11orf54Q9H0W9 315 aaPredicted RBP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 CTSFQ9UBX1 484 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ETHE1O95571 254 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 NRASP01111 189 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 CLEC3BP05452 202 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ZNF718Q3SXZ3 478 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 GCNT2Q8N0V5 402 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 BATF2Q8N1L9 274 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 OR51H1Q8NH63 302 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 GABARAPL3Q9BY60 117 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 GPATCH2Q9NW75 528 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ANKRD61A6NGH8 418 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 TMEM200CA6NKL6 621 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 TNFSF11O14788 317 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 CCR6P51684 374 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 MCCD1P59942 119 aaPredicted RBP15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 HTR4Q13639 388 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 SUMF1Q8NBK3 374 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 OR51A4Q8NGJ6 313 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ARV1Q9H2C2 271 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 GPR84Q9NQS5 396 aa15.32■□□□□ 0.04
CROCCP3-201ENST00000263511 ZAR1LA6NP61 321 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 SLC2A10O95528 541 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 CRYABP02511 175 aaKnown RBP15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 SMIM18P0DKX4 95 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 CNR1P21554 472 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 ARRB2P32121 409 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 PPT1P50897 306 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 DOC2BQ14184 412 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 FXNQ16595 210 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 LAIR1Q6GTX8 287 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 DEFB108BQ8NET1 73 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 OR2V1Q8NHB1 315 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 CNRIP1Q96F85 164 aaPredicted RBP15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 POM121CA8CG34 1229 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 B4GALT3O60512 393 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 HLA-DOBP13765 273 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 RFC3P40938 356 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 RFX2P48378 723 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 PRAMEF5Q5TYX0 476 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 PRAMEF6Q5VXH4 476 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 TMEM200AQ86VY9 491 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 IER2Q9BTL4 223 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 PRKNO60260 465 aaPredicted RBP15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 RPS19P39019 145 aaKnown RBP15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 FZD2Q14332 565 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 ANKRD16Q6P6B7 361 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 SLCO4A1Q96BD0 722 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 GNG13Q9P2W3 67 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 ADH4P08319 380 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 MYF5P13349 255 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 NME2P22392 152 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 HCCSP53701 268 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 DBPQ10586 325 aaPredicted RBP15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 TMPRSS7Q7RTY8 843 aa15.31■□□□□ 0.04
CROCCP3-201ENST00000263511 DHHO43323 396 aa15.3■□□□□ 0.04
CROCCP3-201ENST00000263511 FOLR1P15328 257 aa15.3■□□□□ 0.04
CROCCP3-201ENST00000263511 PRPH2P23942 346 aa15.3■□□□□ 0.04
CROCCP3-201ENST00000263511 PCK2Q16822 640 aa15.3■□□□□ 0.04
CROCCP3-201ENST00000263511 OR10K1Q8NGX5 313 aa15.3■□□□□ 0.04
CROCCP3-201ENST00000263511 SLC25A46Q96AG3 418 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms