RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KLF17Q5JT82 389 aaPredicted RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 TSEN54Q7Z6J9 526 aaKnown RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 VTCN1Q7Z7D3 282 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 ZER1Q7Z7L7 766 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 MICU2Q8IYU8 434 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 OR2T12Q8NG77 320 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 OR13C2Q8NGS9 318 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 POP5Q969H6 163 aaKnown RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 DACT3Q96B18 629 aaPredicted RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 SAMD8Q96LT4 415 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 PATZ1Q9HBE1 687 aaKnown RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 EMC7Q9NPA0 242 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 MMP26Q9NRE1 261 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 TUBG2Q9NRH3 451 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 TMEM106BQ9NUM4 274 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 UBAP1Q9NZ09 502 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 ADAM18Q9Y3Q7 739 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 A0A087WUU8 490 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 A0A1W2PPL8 197 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ELOVL7A1L3X0 281 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ISPDA4D126 451 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 OR6C6A6NF89 314 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 H7C1C5 153 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 AHCYL1O43865 530 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 TIMM8AO60220 97 aaPredicted RBP8.67□□□□□ -1.02
VPS50-201ENST00000251739 ABHD16AO95870 558 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 IGHA1P01876 353 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 CD14P08571 375 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 HKR1P10072 659 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 CTLA4P16410 223 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 GSTM3P21266 225 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 SLC6A9P48067 706 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ERFP50548 548 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ARHGDIAP52565 204 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 SEC61A1P61619 476 aaKnown RBP8.67□□□□□ -1.02
VPS50-201ENST00000251739 LCN6P62502 163 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 PAX2Q02962 417 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 TRAM2Q15035 370 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 PRR31Q5SQ13 230 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 TMPRSS11FQ6ZWK6 438 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ZNF771Q7L3S4 317 aaPredicted RBP8.67□□□□□ -1.02
VPS50-201ENST00000251739 OAFQ86UD1 273 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 LRRC28Q86X40 367 aaPredicted RBP8.67□□□□□ -1.02
VPS50-201ENST00000251739 RNF113BQ8IZP6 322 aaKnown RBP8.67□□□□□ -1.02
VPS50-201ENST00000251739 SPICQ8N5J4 248 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 OR51A7Q8NH64 312 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ST7LQ8TDW4 575 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ACOT11Q8WXI4 607 aaPredicted RBP8.67□□□□□ -1.02
VPS50-201ENST00000251739 C22orf15Q8WYQ4 148 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 NTN4Q9HB63 628 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 CMTM6Q9NX76 183 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 RHCGQ9UBD6 479 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 ATPIF1Q9UII2 106 aa8.67□□□□□ -1.02
VPS50-201ENST00000251739 TEX13CA0A0J9YWL9 993 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 A0A1B0GWJ7 208 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 PRSS37A4D1T9 235 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 DNAJC9-AS1A6NH13 148 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 EFCAB9A8MZ26 197 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 J3KTA2 159 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 TMPRSS2O15393 492 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 SGCEO43556 437 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 DOK2O60496 412 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 IFNW1P05000 195 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 H2AFXP16104 143 aaPredicted RBP8.66□□□□□ -1.02
VPS50-201ENST00000251739 TNFRSF1AP19438 455 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 PRTN3P24158 256 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 FPR2P25090 351 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 HTR5AP47898 357 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 BTG1P62324 171 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 SCRN3Q0VDG4 424 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ZNF154Q13106 437 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 AQP6Q13520 282 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 MAPRE2Q15555 327 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ARL9Q6T311 187 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 MBOAT2Q6ZWT7 520 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 PCYOX1LQ8NBM8 494 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ITLN1Q8WWA0 313 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 LZICQ8WZA0 190 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 HAVCR1Q96D42 359 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 TPD52L3Q96J77 140 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 Q96M85 177 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ZNF48Q96MX3 618 aaPredicted RBP8.66□□□□□ -1.02
VPS50-201ENST00000251739 GPX7Q96SL4 187 aaPredicted RBP8.66□□□□□ -1.02
VPS50-201ENST00000251739 ZNF747Q9BV97 191 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ANKRD19PQ9H560 264 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ZMAT3Q9HA38 289 aaKnown RBP8.66□□□□□ -1.02
VPS50-201ENST00000251739 FGFR1OP2Q9NVK5 253 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 PLEK2Q9NYT0 353 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 ZNF69Q9UC07 566 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 IL19Q9UHD0 177 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 PPP1R3CQ9UQK1 317 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 STARD10Q9Y365 291 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 PPIAL4AQ9Y536 164 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 INSIG2Q9Y5U4 225 aa8.66□□□□□ -1.02
VPS50-201ENST00000251739 TMEM178BH3BS89 294 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 CLDN34H7C241 214 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 SLC22A2O15244 555 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms