RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CT45A9P0DMV2 189 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 ALOX5APP20292 161 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 SQSTM1Q13501 440 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 CT45A2Q5DJT8 189 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 MESTQ5EB52 335 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 WBP2NLQ6ICG8 309 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 ATG4DQ86TL0 474 aaPredicted RBP15.24■□□□□ 0.03
FOXA1-201ENST00000250448 GABRG1Q8N1C3 465 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 LIPHQ8WWY8 451 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 MVB12AQ96EY5 273 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 MNTQ99583 582 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 MMP25Q9NPA2 562 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 RARRES3Q9UL19 164 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 PMS2P2O95744 297 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 CLPSP04118 112 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 PNMTP11086 282 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 MGMTP16455 207 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 GPR85P60893 370 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 ACY1Q03154 408 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 WDR38Q5JTN6 314 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 LY6G6FQ5SQ64 297 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 LCN10Q6JVE6 187 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 C12orf45Q8N5I9 185 aaPredicted RBP15.24■□□□□ 0.03
FOXA1-201ENST00000250448 GPX8Q8TED1 209 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 FAM3DQ96BQ1 224 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 DCBLD2Q96PD2 775 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 TSPAN32Q96QS1 320 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 NRSN2Q9GZP1 204 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 GRHPRQ9UBQ7 328 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 UPB1Q9UBR1 384 aa15.24■□□□□ 0.03
FOXA1-201ENST00000250448 LOC100289279A0A1B0GTE1 492 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 TOX3O15405 576 aaPredicted RBP15.23■□□□□ 0.03
FOXA1-201ENST00000250448 CCL4P13236 92 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 ACTBP60709 375 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 ACTG1P63261 375 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 C2orf76Q3KRA6 126 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 LRRC69Q6ZNQ3 347 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 INTS14Q96SY0 518 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 LPAR4Q99677 370 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 USB1Q9BQ65 265 aaKnown RBP15.23■□□□□ 0.03
FOXA1-201ENST00000250448 SLC17A5Q9NRA2 495 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 TMEM82A0PJX8 343 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 CDC14CA4D256 554 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 HSPB2A8KAH6 182 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 SLC17A2O00624 439 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 MELTFP08582 738 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 OR4E1P0C645 316 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 CCR4P51679 360 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 ARHGDIBP52566 201 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 RPL18Q07020 188 aaKnown RBP15.23■□□□□ 0.03
FOXA1-201ENST00000250448 HSPB2Q16082 182 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 RHBDD2Q6NTF9 364 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 ZNF615Q8N8J6 731 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 RASL12Q9NYN1 266 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 TMEM14AQ9Y6G1 99 aa15.23■□□□□ 0.03
FOXA1-201ENST00000250448 DNASE2O00115 360 aaPredicted RBP15.22■□□□□ 0.03
FOXA1-201ENST00000250448 OIP5O43482 229 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 GPANK1O95872 356 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 RENP00797 406 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 ASAH2BP0C7U1 165 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 MST1P26927 711 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 TAS2R19P59542 299 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 FUT7Q11130 342 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 EMC4Q5J8M3 183 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 OR10K1Q8NGX5 313 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 STT3BQ8TCJ2 826 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 THRSPQ92748 146 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 GAL3ST4Q96RP7 486 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 AMELYQ99218 206 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 ATG5Q9H1Y0 275 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 IGKV3D-11A0A0A0MRZ8 115 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 AGTR1P30556 359 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 CCKBRP32239 447 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 SERTAD2Q14140 314 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 C21orf62-AS1Q17RA5 79 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 EEF1A1P5Q5VTE0 462 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 ZNF546Q86UE3 836 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 STEAP2Q8NFT2 490 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 POTEKPQ9BYX7 375 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 CELSR3Q9NYQ7 3312 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 PHYHO14832 338 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 EIF4E2O60573 245 aaKnown RBP15.22■□□□□ 0.03
FOXA1-201ENST00000250448 RAB3DO95716 219 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 ACHEP22303 614 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 BPIFB3P59826 476 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.22■□□□□ 0.03
FOXA1-201ENST00000250448 NKAIN1Q4KMZ8 207 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 KLHL26Q53HC5 615 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 FAM74A1Q5RGS3 127 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 C17orf107Q6ZR85 190 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 TMED4Q7Z7H5 227 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 PRR22Q8IZ63 422 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 BEST3Q8N1M1 668 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 KCNG2Q9UJ96 466 aa15.22■□□□□ 0.03
FOXA1-201ENST00000250448 A0A0D9SG52 128 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 BLACEA4D250 179 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 ZNF28P17035 718 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 CD226Q15762 336 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 PPP1R3BQ86XI6 285 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 DNTTIP1Q9H147 329 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms