RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 NKD1Q969G9 470 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 FOXRED1Q96CU9 486 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 ABHD6Q9BV23 337 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 ADAM19Q9H013 955 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 TMEM100Q9NV29 134 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 LRP12Q9Y561 859 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 ARID1BQ8NFD5 2236 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 CPED1A4D0V7 1026 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 SCDO00767 359 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 F12P00748 615 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 BGLAPP02818 100 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 RFC3P40938 356 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 PHF19Q5T6S3 580 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 OR52W1Q6IF63 320 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 H3F3CQ6NXT2 135 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 KCTD18Q6PI47 426 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 POMZP3Q6PJE2 187 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 YAF2Q8IY57 180 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 PAQR4Q8N4S7 273 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 ZDHHC22Q8N966 263 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 ADAD2Q8NCV1 583 aaKnown RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 OR4D6Q8NGJ1 314 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 METTL21AQ8WXB1 218 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 ASB12Q8WXK4 309 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 MEGF11A6BM72 1044 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 RAB27BO00194 218 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CLDN4O14493 209 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 STK17BO94768 372 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CRHP06850 196 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 ERCC1P07992 297 aaPredicted RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 COL9A1P20849 921 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 VAMP1P23763 118 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 MPZP25189 248 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 ARRB1P49407 418 aaPredicted RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 ACKR1Q16570 336 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 KIF26BQ2KJY2 2108 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 ZNF260Q3ZCT1 412 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 C1orf100Q5SVJ3 147 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 SPAG16Q8N0X2 631 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 AVL9Q8NBF6 648 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 OR4K17Q8NGC6 315 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 OR4A4PQ8NGN8 299 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CMBLQ96DG6 245 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 SELENOIQ9C0D9 397 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 GDF2Q9UK05 429 aaPredicted RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 IGLV1-36A0A0B4J1U3 117 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 FAM221BA6H8Z2 402 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 EIF1AYO14602 144 aaKnown RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 TNFRSF10CO14798 259 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 EFSO43281 561 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 UTS2O95399 124 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CTLA4P16410 223 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 PSMB6P28072 239 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 EIF1AXP47813 144 aaKnown RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 DNASE1L1P49184 302 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 PNLIPRP2P54317 469 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 SQSTM1Q13501 440 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 EIF2B1Q14232 305 aaKnown RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 TRAPPC6BQ86SZ2 158 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 SLC30A7Q8NEW0 376 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 OR13C3Q8NGS6 347 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 ARL11Q969Q4 196 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 PTX4Q96A99 478 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 RTN4RQ9BZR6 473 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CHMP1AQ9HD42 196 aaPredicted RBP13.91□□□□□ -0.18
DDX55-201ENST00000238146 RHBDD3Q9Y3P4 386 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 CSAG2Q9Y5P2 127 aa13.91□□□□□ -0.18
DDX55-201ENST00000238146 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.18
DDX55-201ENST00000238146 LOC390937A0A1W2PQ73 354 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 NUDT21O43809 227 aaKnown RBP13.9□□□□□ -0.18
DDX55-201ENST00000238146 LMX1BO60663 402 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 TPT1P13693 172 aaKnown RBP13.9□□□□□ -0.18
DDX55-201ENST00000238146 AKR1C4P17516 323 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 NPBWR1P48145 328 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 PRTGQ2VWP7 1150 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 OOSP2Q86WS3 158 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 BAP18Q8IXM2 172 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 SLC37A2Q8TED4 501 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 S1PR5Q9H228 398 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 BIN3Q9NQY0 253 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 CTSFQ9UBX1 484 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 PRODH2Q9UF12 536 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 HHLA2Q9UM44 414 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 F5P12259 2224 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 A0A1W2PQF6 199 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 C17orf51A8MQB3 221 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 WISP1O95388 367 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 IL33O95760 270 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 NTSR1P30989 418 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 RPL27P61353 136 aaKnown RBP13.9□□□□□ -0.18
DDX55-201ENST00000238146 BIKQ13323 160 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 TOMM34Q15785 309 aaPredicted RBP13.9□□□□□ -0.18
DDX55-201ENST00000238146 FAHD2BQ6P2I3 314 aaPredicted RBP13.9□□□□□ -0.18
DDX55-201ENST00000238146 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 PARGQ86W56 976 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 ZNF321PQ8N8H1 164 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms