RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 EIF4E3Q8N5X7 224 aaKnown RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 OR10G3Q8NGC4 313 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 OR9I1Q8NGQ6 314 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SLC25A40Q8TBP6 338 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 RPS10P5Q9NQ39 176 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 MYO5AQ9Y4I1 1855 aaKnown RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 METTL12A8MUP2 240 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 NUDT7P0C024 238 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SOX4Q06945 474 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 SEMA3BQ13214 749 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 PHC2Q8IXK0 858 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SIRT6Q8N6T7 355 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ARSGQ96EG1 525 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TPPP3Q9BW30 176 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SMAD9O15198 467 aaKnown RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 COX7A2P2O60397 106 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 NCR1O76036 304 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 GTDC1Q4AE62 458 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ZNF707Q96C28 371 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 RHNO1Q9BSD3 238 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 OCEL1Q9H607 264 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SYNPO2LQ9H987 977 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ASF1BQ9NVP2 202 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 PGAP2Q9UHJ9 254 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 FOXD3Q9UJU5 478 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 PMS2P2O95744 297 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TMIGD3P0DMS9 266 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 HNRNPFP52597 415 aaKnown RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 OR5B3Q8NH48 314 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 C3orf49Q96BT1 292 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ACPTQ9BZG2 426 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 HEXA-AS1Q9H8Q6 139 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TUBG2Q9NRH3 451 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 GPR37O15354 613 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 PNLIPP16233 465 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SLC19A1P41440 591 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 OR1C1Q15619 314 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 CD163Q86VB7 1156 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 FBXL6Q8N531 539 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 OR52L2PQ8NGH6 319 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ACOD1A6NK06 481 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 WNT7AO00755 349 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TMEM11P17152 192 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SDC1P18827 310 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SH3BP2P78314 561 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 HLA-BQ31612 363 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 RNF141Q8WVD5 230 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 PP6455Q8WZ26 134 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 MYOCOSA0A1B0GUC4 107 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TUBAL3A6NHL2 446 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 PRKRAO75569 313 aaKnown RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 ACAA1P09110 424 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 ZBTB25P24278 435 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 EPHA2P29317 976 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 KLF3P57682 345 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 MADCAM1Q13477 382 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 FJX1Q86VR8 437 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 PSD2Q9BQI7 771 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TP63Q9H3D4 680 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 PITPNC1Q9UKF7 332 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 HS3ST1O14792 307 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TOMM34Q15785 309 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 PARM1Q6UWI2 310 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 SIAH1Q8IUQ4 282 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 NUDT22Q9BRQ3 303 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 GPR52Q9Y2T5 361 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ANKUB1A6NFN9 424 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 JTBO76095 146 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 CAPNS1P04632 268 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 NME1P15531 152 aaKnown RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 CNR1P21554 472 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 LIM2P55344 173 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
MED28-201ENST00000237380 ZNF441Q8N8Z8 693 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 NOX4Q9NPH5 578 aa6.78□□□□□ -1.32
MED28-201ENST00000237380 TRAV27A0A087WT01 109 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 F2RL2O00254 374 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 HSPB6O14558 160 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 FAHP16930 419 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 ZNF546Q86UE3 836 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 OR1L6Q8NGR2 347 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 APH1BQ8WW43 257 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 DNAJC15Q9Y5T4 150 aa6.77□□□□□ -1.32
MED28-201ENST00000237380 MEIKINA0A087WXM9 373 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 M0R135 149 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FPR3P25089 353 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 ACKR3P25106 362 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 MTNR1BP49286 362 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 BCL2L2Q92843 193 aaPredicted RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 ZNF799Q96GE5 643 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 LINC00615Q96LM1 132 aaPredicted RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 MFRPQ9BY79 579 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 DHCR7Q9UBM7 475 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 NUP205Q92621 2012 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 CNMDO75829 334 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 NDUFA6P56556 154 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 ZNF252P-AS1Q0IIN9 211 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 SHBQ15464 509 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 SSX1Q16384 188 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 OR1L4Q8NGR5 311 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms