RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 RAB39BQ96DA2 213 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 TMED7Q9Y3B3 224 aa11.75□□□□□ -0.53
MSH2-201ENST00000233146 NME2P1O60361 137 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 SLCO2B1O94956 709 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 ZFPL1O95159 310 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 TBX18O95935 607 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 PGA4P0DJD7 388 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 PGA5P0DJD9 388 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 CD37P11049 281 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 BTG2P78543 158 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 FAM3AP98173 230 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 CRMP1Q14194 572 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 GXYLT1Q4G148 440 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 MTSS1LQ765P7 747 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 ZNF101Q8IZC7 436 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 CYB561A3Q8NBI2 242 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 RELTQ969Z4 430 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 SLC35G5Q96KT7 338 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
MSH2-201ENST00000233146 ZDHHC3Q9NYG2 299 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 LRFN1Q9P244 771 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 TACR2P21452 398 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 UPP1Q16831 310 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 HYAL4Q2M3T9 481 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 C4orf17Q53FE4 359 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 ZNF836Q6ZNA1 936 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 GALNTL5Q7Z4T8 443 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 SLC41A3Q96GZ6 507 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 DPH1Q9BZG8 443 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 SIDT1Q9NXL6 827 aaKnown RBP11.74□□□□□ -0.53
MSH2-201ENST00000233146 USP36Q9P275 1121 aaKnown RBP11.74□□□□□ -0.53
MSH2-201ENST00000233146 ICAM5Q9UMF0 924 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
MSH2-201ENST00000233146 A0A1B0GW64 132 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 ZNF736B4DX44 427 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 CLDN7O95471 211 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 SNAI1O95863 264 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 PTNP21246 168 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 FRKP42685 505 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 RPL29P47914 159 aaKnown RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 SLC37A1P57057 533 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 NANOS3P60323 173 aaKnown RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 ENPP2Q13822 863 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 TANGO2Q6ICL3 276 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 LEG1Q6P5S2 330 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 OR5AK2Q8NH90 309 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 OR8D2Q9GZM6 311 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 PDE7BQ9NP56 450 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 COLEC10Q9Y6Z7 277 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 DHRS7CA6NNS2 312 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 RIIAD1A6NNX1 92 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 H3BQ15 152 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 K7EP13 123 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 CST2P09228 141 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 OR5H8P0DN80 308 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 RAP1BP61224 184 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 PLEKHS1Q5SXH7 462 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 SLC39A5Q6ZMH5 540 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 TMEM150AQ86TG1 271 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 PLPP5Q8NEB5 264 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 KLHDC9Q8NEP7 349 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 OR51D1Q8NGF3 324 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 OR4C6Q8NH72 309 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 ZNF587Q96SQ5 575 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 CD180Q99467 661 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 PBDC1Q9BVG4 233 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 ZNF107Q9UII5 783 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 H7C4K7 107 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 M0QZQ0 153 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 PEX12O00623 359 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 TBX19O60806 448 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 GAPDHP04406 335 aaKnown RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 ERCC1P07992 297 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 ZNF28P17035 718 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 HOXC12P31275 282 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 SP3Q02447 781 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 CDKN3Q16667 212 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 LEMD1Q68G75 181 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 SLC25A24Q6NUK1 477 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 KIRREL2Q6UWL6 708 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 CD300LGQ6UXG3 332 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 LSRQ86X29 649 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 SUMF2Q8NBJ7 301 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 DNAJB3Q8WWF6 145 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 EXTL1Q92935 676 aa11.73□□□□□ -0.53
MSH2-201ENST00000233146 ALKBH3Q96Q83 286 aaPredicted RBP11.73□□□□□ -0.53
MSH2-201ENST00000233146 GEMIN2O14893 280 aaKnown RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 SLC16A8O95907 504 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 CYB5AP00167 134 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 MMP7P09237 267 aaPredicted RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 CEACAM8P31997 349 aaPredicted RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 GLIPR1P48060 266 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 OR5I1Q13606 314 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 ADAD2Q8NCV1 583 aaKnown RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms