RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Vmn2r45L7N2B5 852 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn2r29L7N2D4 852 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Prdx6O08709 224 aaKnown RBP14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gp6P0C191 313 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Msx1P13297 303 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tango2P54797 276 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 GnrhrQ01776 327 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tas2r116Q7M713 305 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Uhrf2Q7TMI3 803 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1225Q7TR01 311 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm21627Q810R0 219 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Foxj3Q8BUR3 623 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Fbxo4Q8CHQ0 385 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Zc3h10Q8R205 435 aaKnown RBP14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Efcab7Q8VDY4 628 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr870Q8VGG4 311 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ndufb7Q9CR61 137 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm28897A0A087WP44 222 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1234A2AVK5 314 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm15446D3Z5Y8 553 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ccl22O88430 92 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Prkar1bP12849 381 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pgap1Q3UUQ7 922 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr835Q7TRG7 311 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Kcnmb4Q9JIN6 210 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cdc7Q9Z0H0 564 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Esp15A8R0U8 85 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 1700080E11RikE9Q9G1 206 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn2r89O35199 507 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Klk1b3P00756 261 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Hcrtr2P58308 460 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pithd1Q8BWR2 211 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1487Q8VFQ6 315 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cdca3Q99M54 266 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 BambiQ9D0L6 260 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Prl8a6Q9DAY2 240 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Trim2Q9ESN6 744 aaKnown RBP14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Rgs21V9GXQ3 152 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Prr23a2D3YWX5 253 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Capza2P47754 286 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Defb4P82019 63 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 1700066B19RikQ3TS39 127 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Fstl4Q5STE3 841 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Zfp748Q7TPL6 888 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Serinc5Q8BHJ6 461 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Acot4Q8BWN8 421 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Q8C784 167 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn1r72Q8K3N7 306 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr539Q8VGL9 319 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Slc39a8Q91W10 462 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pcdhga3Q91XY5 928 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Lin37Q9D8N6 246 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Bex2Q9WTZ8 129 aa14.73□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr618K7N6B3 318 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Dbil5O09035 87 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 GcatO88986 416 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cxcl2P10889 100 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tnfrsf1bP25119 474 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Rpl18P35980 188 aaKnown RBP14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Rap2bP61226 183 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Nxt2Q3UNA4 142 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 C1rlQ3UZ09 482 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cyb561a3Q6P1H1 242 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 P4ha3Q6W3F0 542 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ticam1Q80UF7 732 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Zfp119bQ8K0G9 543 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1241Q8VF91 314 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Elp4Q9ER73 422 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Igkv17-127A0A0G2JDN5 117 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 4930563M21RikA0A1L1SUT5 578 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Actl10A2AKE7 346 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn1r68E9Q0V3 319 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pias3O54714 628 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 P03976 113 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Spi1P17433 272 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Urb1Q571H0 2274 aaKnown RBP14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Mettl7a2Q5I0W6 244 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tas2r113Q7M711 309 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Jazf1Q80ZQ5 243 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Stk35Q80ZW0 539 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Lhfpl6Q8BM86 200 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gpr107Q8BUV8 551 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 SbsnQ8CIT9 700 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 NaxeQ8K4Z3 282 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1217Q8VGG1 304 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Oasl1Q8VI94 511 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Chrm5Q920H4 532 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cryzl1Q921W4 348 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ankrd22Q9D3J5 191 aa14.72□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pusl1A2ADA5 291 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 AgmatA2AS89 358 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm13762A2ATG2 311 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Trabd2bB1ATG9 517 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm21560D3Z7A4 205 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm3099J3QPA5 205 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 4930555G01RikL7N253 205 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pou3f1P21952 449 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Acta2P62737 377 aaKnown RBP14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 Actg2P63268 376 aa14.71□□□□□ -0.05
Trim28-201ENSMUST00000005705 HfeP70387 359 aa14.71□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms