RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CKLFQ9UBR5 152 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 TMEM184BQ9Y519 407 aaPredicted RBP9.81□□□□□ -0.84
SNIP1-204ENST00000638725 C17orf105B2RV13 164 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 LMX1BO60663 402 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 CD2P06729 351 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 CTLA4P16410 223 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 IGFBP3P17936 291 aaPredicted RBP9.81□□□□□ -0.84
SNIP1-204ENST00000638725 BDKRB2P30411 391 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 SKP1P63208 163 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 FLI1Q01543 452 aaPredicted RBP9.81□□□□□ -0.84
SNIP1-204ENST00000638725 BIKQ13323 160 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 C1orf61Q13536 156 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 EIF2B1Q14232 305 aaKnown RBP9.81□□□□□ -0.84
SNIP1-204ENST00000638725 ACKR1Q16570 336 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 PAN3Q58A45 887 aaKnown RBP9.81□□□□□ -0.84
SNIP1-204ENST00000638725 ARMC6Q6NXE6 501 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 LPCAT3Q6P1A2 487 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 UNQ6126/PRO20091Q6UXV3 157 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 ACOT7LQ6ZUV0 252 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 RHOUQ7L0Q8 258 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF584Q8IVC4 421 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 MMABQ96EY8 250 aaPredicted RBP9.81□□□□□ -0.84
SNIP1-204ENST00000638725 CST11Q9H112 138 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 IGFLR1Q9H665 355 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 ASF1BQ9NVP2 202 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 PRODH2Q9UF12 536 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 GMEB2Q9UKD1 530 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 LRP12Q9Y561 859 aa9.81□□□□□ -0.84
SNIP1-204ENST00000638725 PRSS37A4D1T9 235 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 WIPF3A6NGB9 483 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 F5H0A9 414 aaPredicted RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 SULT2B1O00204 365 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ATG12O94817 140 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 IL33O95760 270 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 DCNP07585 359 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ZBTB25P24278 435 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 AVPR2P30518 371 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CASRP41180 1078 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 RIDAP52758 137 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CXADRP78310 365 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 HHEXQ03014 270 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF117Q03924 483 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 TMEM88Q6PEY1 159 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 MARCH3Q86UD3 253 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CATSPERDQ86XM0 798 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 SLC22A18ASQ8N1D0 253 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 GVQW1Q8N7I0 195 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 GPBAR1Q8TDU6 330 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ASB17Q8WXJ9 295 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 MRGPRFQ96AM1 343 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 C8orf44Q96CB5 159 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ADOQ96SZ5 270 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 TSNAXQ99598 290 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ADAT1Q9BUB4 502 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ABHD6Q9BV23 337 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ADAM19Q9H013 955 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 GAREM1Q9H706 876 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 TMED7Q9Y3B3 224 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 IGLV1-36A0A0B4J1U3 117 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 LDLRAD4O15165 306 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 HCRTR2O43614 444 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 SIGLEC6O43699 453 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ICOSLGO75144 302 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 MPZL1O95297 269 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CXCR1P25024 350 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 DNASE1L1P49184 302 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 HTRA3P83110 453 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ELOCQ15369 112 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 SLC22A6Q4U2R8 563 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 OR52W1Q6IF63 320 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 LYG2Q86SG7 212 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 PUSL1Q8N0Z8 303 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 OR5T2Q8NGG2 359 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 OR13C3Q8NGS6 347 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CASTOR1Q8WTX7 329 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 WNT2BQ93097 391 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CMBLQ96DG6 245 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 PHYHIPLQ96FC7 376 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 MRGPRX1Q96LB2 322 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF587Q96SQ5 575 aaPredicted RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 NUDT9Q9BW91 350 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 SLCO5A1Q9H2Y9 848 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 PIGMQ9H3S5 423 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 MBD2Q9UBB5 411 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF175Q9Y473 711 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 LRP4O75096 1905 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 OR14I1A6ND48 311 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 NUDT14O95848 222 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 TNFP01375 233 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ADCYAP1P18509 176 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 FSTP19883 344 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CD96P40200 585 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 RPL27P61353 136 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 ROM1Q03395 351 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 GUCA2BQ16661 112 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 RNASE10Q5GAN6 216 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 VWA2Q5GFL6 755 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 SLC25A42Q86VD7 318 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms