RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ADAM5Q6NVV9 412 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 ADAMTSL4Q6UY14 1074 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 ZNF573Q86YE8 665 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 OR51A4Q8NGJ6 313 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 EDAQ92838 391 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 COMMD5Q9GZQ3 224 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 GPR55Q9Y2T6 319 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 TEX50A0A1B0GTY4 177 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 ZNF239Q16600 458 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 GHSRQ92847 366 aa12.13□□□□□ -0.47
SYNGAP1-208ENST00000629380 ACSM4P0C7M7 580 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 EN2P19622 333 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 LINC00299Q6ZSB3 139 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 LAX1Q8IWV1 398 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 CHST14Q8NCH0 376 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 DBX1A6NMT0 343 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 GOSR1O95249 250 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 USF1P22415 310 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 MEOX1P50221 254 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 ILKQ13418 452 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 IL37Q9NZH6 218 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SLCO3A1Q9UIG8 710 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 GIPP09681 153 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SOX4Q06945 474 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 GPRIN1Q7Z2K8 1008 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 DVL3Q92997 716 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 RBPMSQ93062 196 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 B3GALT5Q9Y2C3 310 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SCN7AQ01118 1682 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 TRDV1A0A1B0GX56 115 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 TNFSF8P32971 234 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 DEFB103AP81534 67 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 TMEM18Q96B42 140 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 ATP1B1P05026 303 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 VAMP3Q15836 100 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 BAK1Q16611 211 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 EMC4Q5J8M3 183 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 TMUB2Q71RG4 321 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 KCNG2Q9UJ96 466 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 OR8G3PP0DMU2 310 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 NTF3P20783 257 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 BTG1P62324 171 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 PXDC1Q5TGL8 231 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SYT9Q86SS6 491 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 FAM117AQ9C073 453 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 PRAMEF25A6NGN4 478 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 OR7C2O60412 319 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 CNN1P51911 297 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 SLC30A3Q99726 388 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 GPR45Q9Y5Y3 372 aa12.12□□□□□ -0.47
SYNGAP1-208ENST00000629380 COX7A2P2O60397 106 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 HOXD13P35453 343 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 MARCH8Q5T0T0 291 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 SHHQ15465 462 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 PRAMEF5Q5TYX0 476 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 C9orf135Q5VTT2 229 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 PRAMEF6Q5VXH4 476 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 ANGPTL6Q8NI99 470 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 ABHD4Q8TB40 342 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 SLC38A5Q8WUX1 472 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 LCORQ96JN0 433 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 HDAC8Q9BY41 377 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 RAB18Q9NP72 206 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.11□□□□□ -0.472e-16■■■□□ 15.2
SYNGAP1-208ENST00000629380 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 ADRA1AP35348 466 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 FOXN4Q96NZ1 517 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 STACQ99469 402 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 HSPB2A8KAH6 182 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 PDGFBP01127 241 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 SLC5A2P31639 672 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 AKR1C3P42330 323 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 HSPB2Q16082 182 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 MED25Q71SY5 747 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 PRRX2Q99811 253 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 SLC25A32Q9H2D1 315 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 OR52A4PA6NMU1 304 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 ALPLP05186 524 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 CPEP16870 476 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 RETREG3Q86VR2 466 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 HES7Q9BYE0 225 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 UCK1Q9HA47 277 aa12.11□□□□□ -0.47
SYNGAP1-208ENST00000629380 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms