RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ZC3HAV1LQ96H79 300 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-207ENST00000628646 OXGR1Q96P68 337 aa11.12□□□□□ -0.63
SYNGAP1-207ENST00000628646 EXTL2Q9UBQ6 330 aa11.12□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF208O43345 1280 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 SC5DO75845 299 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 UQCRC1P31930 480 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 FAUP35544 74 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 RIN1Q13671 783 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 KRT74Q7RTS7 529 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 SNRNP40Q96DI7 357 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 C12orf10Q9HB07 376 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 MOV10Q9HCE1 1003 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF221Q9UK13 617 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF587BE7ETH6 402 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 KHDRBS3O75525 346 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 NCR1O76036 304 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 PTBP1P26599 531 aaKnown RBP eCLIP11.11□□□□□ -0.632e-8■■■■□ 23.3
SYNGAP1-207ENST00000628646 ST6GAL2Q96JF0 529 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 DKK4Q9UBT3 224 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 MALT1Q9UDY8 824 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF17P17021 662 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 GDI2P50395 445 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 Q6ZS92 163 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 RDH10Q8IZV5 341 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 CA5BP1Q8WTZ4 195 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 ABHD3Q8WU67 409 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 MUCL1Q96DR8 90 aa11.11□□□□□ -0.63
SYNGAP1-207ENST00000628646 A0A087WV48 116 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 K7EM74 188 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 IMPA2O14732 288 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ARPC3O15145 178 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 GLCEO94923 617 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 HSD11B1P28845 292 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 THBS2P35442 1172 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 GALK2Q01415 458 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 LYPD8Q6UX82 237 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 SYS1Q8N2H4 156 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 Q8N402 240 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 LRRC18Q8N456 261 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 MDS2Q8NDY4 140 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 C11orf54Q9H0W9 315 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ING3Q9NXR8 418 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 LIPGQ9Y5X9 500 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 DMDP11532 3685 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 TMIGD3P0DMS9 266 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 NKX2-5P52952 324 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 RPL27P61353 136 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 GLO1Q04760 184 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 PMPCAQ10713 525 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 P2RY14Q15391 338 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 SLC18B1Q6NT16 456 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 LRRN1Q6UXK5 716 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 RBMXL3Q8N7X1 1067 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 SAMD12Q8N8I0 201 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ALKBH3Q96Q83 286 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 KCNJ15Q99712 375 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 TP63Q9H3D4 680 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 PKD1L2Q7Z442 2459 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 HEATR5AQ86XA9 2040 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 E9PI62 339 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 AGFG2O95081 481 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 APEHP13798 732 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ADAM8P78325 824 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 TP53I3Q53FA7 332 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 PLXDC2Q6UX71 529 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 RPTNQ6XPR3 784 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF813Q6ZN06 617 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 RND1Q92730 232 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ALG12Q9BV10 488 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF346Q9UL40 294 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 CFAP54Q96N23 3096 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 ICE1Q9Y2F5 2266 aa11.1□□□□□ -0.63
SYNGAP1-207ENST00000628646 C4BPBP20851 252 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 RCVRNP35243 200 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 DOCK7Q96N67 2140 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 INTS14Q96SY0 518 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 ADGRL4Q9HBW9 690 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 ABRACLQ9P1F3 81 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 LIPT2A6NK58 231 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZIC3O60481 467 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 CLUP10909 449 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 NR4A2P43354 598 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 RNPS1Q15287 305 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 TMEM211Q6ICI0 200 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 FRMD6Q96NE9 622 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 OR2B2Q9GZK3 357 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 FRYLO94915 3013 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 A0A0G2JK05 382 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 LRRC3CA6NJW4 275 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 KIR2DL3P43628 341 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 MAP2K3P46734 347 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 ZNF85Q03923 595 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 FAM205BPQ63HN1 556 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 PYHIN1Q6K0P9 492 aa11.09□□□□□ -0.63
SYNGAP1-207ENST00000628646 VASH1Q7L8A9 365 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms