RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 GRINAQ7Z429 371 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 LINC00346Q8IVM7 164 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 FAM174AQ8TBP5 190 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 DMRTA2Q96SC8 542 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 NPAS1Q99742 590 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 MKL2Q9ULH7 1088 aa10.1□□□□□ -0.79
VARS2-213ENST00000625423 PCNX3Q9H6A9 2034 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SMAD9O15198 467 aaKnown RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 FADS1O60427 444 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ZP3P21754 424 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 FBLP22087 321 aaKnown RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 PNLIPRP2P54317 469 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 OR1D5P58170 312 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 GK2Q14410 553 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 TOMM20Q15388 145 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 MPPED2Q15777 294 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 C16orf47Q6ZP98 133 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 LANCL3Q6ZV70 420 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 TMEM229BQ8NBD8 167 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SMRP1Q8NCR6 262 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 OR6M1Q8NGM8 313 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 OR1N1Q8NGS0 311 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 POTEKPQ9BYX7 375 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 MFFQ9GZY8 342 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 C1orf198Q9H425 327 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ZNF304Q9HCX3 659 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 LOC101059948A0A1B0GTJ6 334 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 LOC107986453A0A1B0GWG9 222 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 LGALS8O00214 317 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 PMS2P2O95744 297 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ZNF28P17035 718 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 FSTP19883 344 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 CRABP1P29762 137 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SLC26A5P58743 744 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 NR0B2Q15466 257 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 TUSC1Q2TAM9 212 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SHISA6Q6ZSJ9 500 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 DCXRQ7Z4W1 244 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 C17orf82Q86X59 251 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 WDFY1Q8IWB7 410 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 C12orf45Q8N5I9 185 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 TSTD1Q8NFU3 115 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 CCDC107Q8WV48 283 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 VN1R1Q9GZP7 353 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 CHRNA10Q9GZZ6 450 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ALX4Q9H161 411 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 UPB1Q9UBR1 384 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ZNF230Q9UIE0 474 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 FBXL2Q9UKC9 423 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 FBXO4Q9UKT5 387 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 R4GMQ9 66 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 A0A1W2PR77 199 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SULT1C2O00338 296 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SRSF10O75494 262 aaKnown RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 SPDEFO95238 335 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 IGHMP01871 453 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 CSN2P05814 226 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ZNF823P16415 610 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 PRKACBP22694 351 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 HSD11B2P80365 405 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 PMPCAQ10713 525 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SCGB2B2Q4G0G5 96 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 LY6G6FQ5SQ64 297 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ZNF660Q6AZW8 331 aaPredicted RBP10.09□□□□□ -0.79
VARS2-213ENST00000625423 C17orf107Q6ZR85 190 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 ADGRE4PQ86SQ3 457 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 NKD1Q969G9 470 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 MVB12AQ96EY5 273 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 G6PC2Q9NQR9 355 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 SLC2A4RGQ9NR83 387 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 OR52A1Q9UKL2 312 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 RP1P56715 2156 aa10.09□□□□□ -0.79
VARS2-213ENST00000625423 IGHV3-20A0A0C4DH32 117 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 TMEM235A6NFC5 223 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 H3BUI4 141 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 CYB5AP00167 134 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 HOXD4P09016 255 aaPredicted RBP10.08□□□□□ -0.8
VARS2-213ENST00000625423 FOLR1P15328 257 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 NUP62P37198 522 aaPredicted RBP10.08□□□□□ -0.8
VARS2-213ENST00000625423 C14orf28Q4W4Y0 310 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 CORO6Q6QEF8 472 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 ZNF454Q8N9F8 522 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 ZNF248Q8NDW4 579 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 ARL5BQ96KC2 179 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 DPYSL5Q9BPU6 564 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 B3GNT4Q9C0J1 378 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 PPA2Q9H2U2 334 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 PFDN2Q9UHV9 154 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 SESN1Q9Y6P5 492 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 TRAV14DV4A0A0A6YYC5 116 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 FTCDNL1E5RQL4 147 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 MELTFP08582 738 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 ZNF735P0CB33 412 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 CD27P26842 260 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 CALCRP30988 508 aa10.08□□□□□ -0.8
VARS2-213ENST00000625423 ATPAF1Q5TC12 328 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms