RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CXCR6O00574 342 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 SGCEO43556 437 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 PIP5K1CO60331 668 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 CCDC22O60826 627 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 ZNF682O95780 498 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 MAKP20794 623 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 MPV17P39210 176 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 RGS6P49758 472 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 LSM6P62312 80 aaKnown RBP10.11□□□□□ -0.79
UPF3B-204ENST00000619445 TNFAIP6P98066 277 aaPredicted RBP10.11□□□□□ -0.79
UPF3B-204ENST00000619445 CDK5R2Q13319 367 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 AQP6Q13520 282 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 ZNF774Q6NX45 483 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 CBLL1Q75N03 491 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 ADCK1Q86TW2 530 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 BPIFB2Q8N4F0 458 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 KLHL36Q8N4N3 616 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.11□□□□□ -0.79
UPF3B-204ENST00000619445 OR5L1Q8NGL2 311 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 GCDHQ92947 438 aaPredicted RBP10.11□□□□□ -0.79
UPF3B-204ENST00000619445 SAMD8Q96LT4 415 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 DCLRE1CQ96SD1 692 aaKnown RBP10.11□□□□□ -0.79
UPF3B-204ENST00000619445 TMPRSS13Q9BYE2 586 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 CCDC134Q9H6E4 229 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 EFCAB1Q9HAE3 211 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 RPS6KA6Q9UK32 745 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 FAM32AQ9Y421 112 aaKnown RBP10.11□□□□□ -0.79
UPF3B-204ENST00000619445 DYSFO75923 2080 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 A0A087WUU8 490 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 PRSS37A4D1T9 235 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 ZSCAN5BA6NJL1 495 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 DOK2O60496 412 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 KITLGP21583 273 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 HTR5AP47898 357 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 LIPEQ05469 1076 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 ENDOGQ14249 297 aaKnown RBP10.1□□□□□ -0.79
UPF3B-204ENST00000619445 TMEM155Q4W5P6 130 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 SLC27A4Q6P1M0 643 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 DNM1P34Q6PK57 102 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 RBMS3Q6XE24 437 aaKnown RBP10.1□□□□□ -0.79
UPF3B-204ENST00000619445 VTCN1Q7Z7D3 282 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 SLC15A3Q8IY34 581 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 POP5Q969H6 163 aaKnown RBP10.1□□□□□ -0.79
UPF3B-204ENST00000619445 RCN3Q96D15 328 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 ZNF570Q96NI8 536 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 C7orf69Q9H7B7 122 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 IL19Q9UHD0 177 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 NPTNQ9Y639 398 aa10.1□□□□□ -0.79
UPF3B-204ENST00000619445 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 TEX13CA0A0J9YWL9 993 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 A0A1W2PRQ8 180 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 GMNNO75496 209 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 NDUFB2O95178 105 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 NGFP01138 241 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 RAC2P15153 192 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 ADRA2CP18825 462 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 SDHAP31040 664 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 GUCY1A3Q02108 690 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 PSG7Q13046 419 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 DGCR6Q14129 220 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 HSP90B2PQ58FF3 399 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 HACD2Q6Y1H2 254 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 IGFN1Q86VF2 1251 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 GLB1L2Q8IW92 636 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 MUC20Q8N307 709 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-204ENST00000619445 C3orf56Q8N813 242 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 OR13C2Q8NGS9 318 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 PTP4A1Q93096 173 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 HSH2DQ96JZ2 352 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 GPX7Q96SL4 187 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-204ENST00000619445 GPA33Q99795 319 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 ZMAT3Q9HA38 289 aaKnown RBP10.09□□□□□ -0.79
UPF3B-204ENST00000619445 NMNAT1Q9HAN9 279 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-204ENST00000619445 TMEM106BQ9NUM4 274 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 CMTM6Q9NX76 183 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 PLEK2Q9NYT0 353 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 UBAP1Q9NZ09 502 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 PURGQ9UJV8 347 aaKnown RBP10.09□□□□□ -0.79
UPF3B-204ENST00000619445 POLR3KQ9Y2Y1 108 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-204ENST00000619445 CACNG2Q9Y698 323 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 ENPP4Q9Y6X5 453 aa10.09□□□□□ -0.79
UPF3B-204ENST00000619445 DOCK11Q5JSL3 2073 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 OR6C6A6NF89 314 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 FFAR1O14842 300 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 KHDRBS3O75525 346 aaKnown RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 SASH3O75995 380 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 SERPINA1P01009 418 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 H1F0P07305 194 aaKnown RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 COX4I1P13073 169 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 RHCEP18577 417 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 CFPP27918 469 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 CRABP1P29762 137 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 GPR4P46093 362 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 YAP1P46937 504 aaKnown RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 RPS6KA3P51812 740 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 SLC7A2P52569 658 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 SMIM11AP58511 58 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms