RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 POLR1DQ9Y2S0 133 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 NBEAQ8NFP9 2946 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 A0A087WZY1 265 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 A0A1W2PNV4 684 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 OR4C45A6NMZ5 311 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 TMCC2O75069 709 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 KHDRBS3O75525 346 aaKnown RBP6.91□□□□□ -1.3
NEK3-207ENST00000617054 EIF4EP06730 217 aaKnown RBP6.91□□□□□ -1.3
NEK3-207ENST00000617054 PATE4P0C8F1 98 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 GAAP10253 952 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 PTGS2P35354 604 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 MTNR1BP49286 362 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 PRKXP51817 358 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 MAP2K6P52564 334 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 PLGLB1Q02325 96 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 ZNF45Q02386 682 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 IL18Q14116 193 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 HYAL4Q2M3T9 481 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 PYDC2Q56P42 97 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 METAP1DQ6UB28 335 aaPredicted RBP6.91□□□□□ -1.3
NEK3-207ENST00000617054 NAA40Q86UY6 237 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 SERPINA12Q8IW75 414 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 GLB1L2Q8IW92 636 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 IZUMO1Q8IYV9 350 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 ZIC4Q8N9L1 334 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 NOXO1Q8NFA2 376 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 FDCSPQ8NFU4 85 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 OR9K2Q8NGE7 335 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 OR10S1Q8NGN2 331 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 OR6S1Q8NH40 331 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 ST7LQ8TDW4 575 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 TTYH2Q9BSA4 534 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 SOX7Q9BT81 388 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 MRPS7Q9Y2R9 242 aaKnown RBP6.91□□□□□ -1.3
NEK3-207ENST00000617054 A3GALT2U3KPV4 340 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 DCDC2BA2VCK2 349 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 PMS2P2O95744 297 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 ADRB1P08588 477 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 LAP3P28838 519 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 THBS2P35442 1172 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 ARG2P78540 354 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 GFOD2Q3B7J2 385 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 CCDC58Q4VC31 144 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 C9orf135Q5VTT2 229 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 OR52N5Q8NH56 324 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 KCNK15Q9H427 330 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 MYEF2Q9P2K5 600 aaKnown RBP6.91□□□□□ -1.3
NEK3-207ENST00000617054 LIPGQ9Y5X9 500 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 TMEM14AQ9Y6G1 99 aa6.91□□□□□ -1.3
NEK3-207ENST00000617054 ADGRG4Q8IZF6 3080 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 TMEM269A0A1B0GVZ9 245 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 C5orf63A6NC05 138 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 TAF4O00268 1085 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 PFDN1O60925 122 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 UCHL1P09936 223 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 CASRP41180 1078 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 NBL1P41271 181 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 MMP16P51512 607 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
NEK3-207ENST00000617054 EGR3Q06889 387 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 CD300CQ08708 224 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 TM4SF20Q53R12 229 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 THEM4Q5T1C6 240 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 AGAP7PQ5VUJ5 663 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 Q6ZNX1 250 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.9□□□□□ -1.3
NEK3-207ENST00000617054 TMEM251Q8N6I4 163 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 OR10H5Q8NGA6 315 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 OR6X1Q8NH79 312 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 TRMT10AQ8TBZ6 339 aaKnown RBP6.9□□□□□ -1.3
NEK3-207ENST00000617054 TSEN15Q8WW01 171 aaKnown RBP6.9□□□□□ -1.3
NEK3-207ENST00000617054 GCDHQ92947 438 aaPredicted RBP6.9□□□□□ -1.3
NEK3-207ENST00000617054 RHOVQ96L33 236 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 FER1L6-AS2Q96M78 137 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 AGAP4Q96P64 663 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 ALKBH3Q96Q83 286 aaPredicted RBP6.9□□□□□ -1.3
NEK3-207ENST00000617054 COQ7Q99807 217 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 LHFPL6Q9Y693 200 aa6.9□□□□□ -1.3
NEK3-207ENST00000617054 A0A0G2JMP0 313 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 A0A0X1KG70 313 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 EPXP11678 715 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 ADRA2CP18825 462 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 MEOX1P50221 254 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.31
NEK3-207ENST00000617054 GFRA1P56159 465 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 PLA2G7Q13093 441 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 DEFB109BQ30KR1 87 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 DND1Q8IYX4 353 aaKnown RBP6.9□□□□□ -1.31
NEK3-207ENST00000617054 OR4M2Q8NGB6 313 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 CHPT1Q8WUD6 406 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 AP3S1Q92572 193 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 SLAMF6Q96DU3 332 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 C4orf45Q96LM5 186 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 OR2M2Q96R28 347 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 GAL3ST1Q99999 423 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 FAM173AQ9BQD7 235 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 ZNF552Q9H707 407 aaPredicted RBP6.9□□□□□ -1.31
NEK3-207ENST00000617054 ZNF703Q9H7S9 590 aaPredicted RBP6.9□□□□□ -1.31
NEK3-207ENST00000617054 GLTPQ9NZD2 209 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms