RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TCRBV5S2A0A599 114 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 TMEM129A0AVI4 362 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 DHRS12A0PJE2 317 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 CD5LO43866 347 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 DNAJC8O75937 253 aaPredicted RBP10.59□□□□□ -0.71
CBWD3-208ENST00000612050 LY6HO94772 140 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 UBOX5O94941 541 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 IFNGP01579 166 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 T-ENOLP0DO92 83 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF250P15622 560 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF823P16415 610 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ALDH3B1P43353 468 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 NR4A2P43354 598 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 CHN2P52757 468 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 PPP1CBP62140 327 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ENDOGQ14249 297 aaKnown RBP10.59□□□□□ -0.71
CBWD3-208ENST00000612050 MICAQ29983 383 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 TMEM249Q2WGJ8 235 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF774Q6NX45 483 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF786Q8N393 782 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 OR52E2Q8NGJ4 325 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 OR5L1Q8NGL2 311 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 OR2T4Q8NH00 348 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 OR4K13Q8NH42 304 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 RDH5Q92781 318 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 DCLRE1CQ96SD1 692 aaKnown RBP10.59□□□□□ -0.71
CBWD3-208ENST00000612050 NMNAT3Q96T66 252 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 EGLN1Q9GZT9 426 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
CBWD3-208ENST00000612050 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
CBWD3-208ENST00000612050 RPRD1BQ9NQG5 326 aaKnown RBP10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ASH2LQ9UBL3 628 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 ATPIF1Q9UII2 106 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 U3KQV3 271 aa10.59□□□□□ -0.71
CBWD3-208ENST00000612050 OR6C6A6NF89 314 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 A8MV72 311 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 HIST1H1CP16403 213 aaKnown RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF26P17031 533 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ACHEP22303 614 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 TNFSF4P23510 183 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 CDKN2AP42771 156 aaKnown RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 RGS6P49758 472 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 COX10Q12887 443 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ALKBH6Q3KRA9 238 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 CLEC12AQ5QGZ9 265 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 RASSF6Q6ZTQ3 369 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 PAQR4Q8N4S7 273 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 SDR9C7Q8NEX9 313 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 OR2T33Q8NG76 320 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 OR9Q2Q8NGE9 314 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 TEX47Q8TBZ9 253 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 DIRC2Q96SL1 478 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 RACGAP1Q9H0H5 632 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 HDHD2Q9H0R4 259 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 WNT5BQ9H1J7 359 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 CHODLQ9H9P2 273 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 TBCCD1Q9NVR7 557 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 KLHL21Q9UJP4 597 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 IGLV3-9A0A075B6K5 115 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 H3BN98 237 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 J3QW42 95 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 TIMM8AO60220 97 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 IGHV3-13P01766 116 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 NAT2P11245 290 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF3P17036 446 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 GPR6P46095 362 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF81P51508 661 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 BLVRAP53004 296 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 MRPS11P82912 194 aaKnown RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 MS4A2Q01362 244 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 MAD2L1BPQ15013 274 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 KCNMB1Q16558 191 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 SLC35F1Q5T1Q4 408 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 PTCHD4Q6ZW05 846 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 LRP11Q86VZ4 500 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ZCCHC24Q8N2G6 241 aaKnown RBP10.58□□□□□ -0.72
CBWD3-208ENST00000612050 PROKR2Q8NFJ6 384 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 OR10G2Q8NGC3 310 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 SLC25A40Q8TBP6 338 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 GIPC3Q8TF64 312 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 CLPTM1LQ96KA5 538 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 GPA33Q99795 319 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 CHID1Q9BWS9 393 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 TSSK6Q9BXA6 273 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 BPESC1Q9GZL8 116 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 EGLN3Q9H6Z9 239 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 NKIRAS2Q9NYR9 191 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 IL20Q9NYY1 176 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 KCNG2Q9UJ96 466 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 ZDHHC8Q9ULC8 765 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 B9D1Q9UPM9 204 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 GRIP1Q9Y3R0 1128 aa10.58□□□□□ -0.72
CBWD3-208ENST00000612050 CR1P17927 2039 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms