RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 EID2Q8N6I1 236 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 BHLHE23Q8NDY6 225 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 MAFIPQ8WZ33 124 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 PHYHIPQ92561 330 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 ABHD6Q9BV23 337 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 POTEKPQ9BYX7 375 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 HPF1Q9NWY4 346 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 MED29Q9NX70 200 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 LRP12Q9Y561 859 aa18.36■□□□□ 0.53
SSBP3-216ENST00000610401 RFPL4AA6NLU0 287 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 HMSDA8MTL9 139 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 RFPL4AL1F8VTS6 287 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 TNFP01375 233 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 ASB5Q8WWX0 329 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 MRPL22Q9NWU5 206 aaKnown RBP18.35■□□□□ 0.53
SSBP3-216ENST00000610401 DNASE2O00115 360 aaPredicted RBP18.35■□□□□ 0.53
SSBP3-216ENST00000610401 CD2P06729 351 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 ASAH2BP0C7U1 165 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 BDKRB2P30411 391 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 SKP2Q13309 424 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 TRAPPC6BQ86SZ2 158 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 OR2I1PQ8NGU4 316 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 FGGYQ96C11 551 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 CRISPLD2Q9H0B8 497 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 PTGES2Q9H7Z7 377 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 TAS2R8Q9NYW2 309 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 VDAC3Q9Y277 283 aa18.35■□□□□ 0.53
SSBP3-216ENST00000610401 CPED1A4D0V7 1026 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF705EA8MWA4 302 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 SLC17A2O00624 439 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 ATG12O94817 140 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 TAS2R19P59542 299 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 DHODHQ02127 395 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 C9orf50Q5SZB4 431 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 TMEM71Q6P5X7 295 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 COX15Q7KZN9 410 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 EXD3Q8N9H8 876 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 TMPRSS13Q9BYE2 586 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 TBL1XR1Q9BZK7 514 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 NKX6-2Q9C056 277 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 FBXO9Q9UK97 447 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 H3BML4 177 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 FARS2O95363 451 aaKnown RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 IL12BP29460 328 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 HRH1P35367 487 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 PRKXP51817 358 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 INSM1Q01101 510 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 RASGEF1BQ0VAM2 473 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 SLC9A3R2Q15599 337 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 DCXRQ7Z4W1 244 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 LRRC75AQ8NAA5 344 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 NPRL2Q8WTW4 380 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 TMED6Q8WW62 240 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 MCHR2Q969V1 340 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 SELENOIQ9C0D9 397 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 MLXQ9UH92 298 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 C2orf16Q68DN1 1984 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 CSF2RBP32927 897 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 AKR1C3P42330 323 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 RSPO4Q2I0M5 234 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 RNASE10Q5GAN6 216 aaKnown RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 EEF1A1P5Q5VTE0 462 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 FJX1Q86VR8 437 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 ZNF595Q8IYB9 648 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 POLE3Q9NRF9 147 aa18.34■□□□□ 0.53
SSBP3-216ENST00000610401 RABL2AQ9UBK7 228 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-216ENST00000610401 TRBV5-7A0A0A0MS05 114 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 LDOC1O95751 146 aaPredicted RBP18.33■□□□□ 0.53
SSBP3-216ENST00000610401 ERCC1P07992 297 aaPredicted RBP18.33■□□□□ 0.53
SSBP3-216ENST00000610401 THEGLP0DJG4 465 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 PGAM2P15259 253 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 RIDAP52758 137 aaKnown RBP18.33■□□□□ 0.53
SSBP3-216ENST00000610401 GLT8D1Q68CQ7 371 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 PAPD4Q6PIY7 484 aaKnown RBP18.33■□□□□ 0.53
SSBP3-216ENST00000610401 OR13C8Q8NGS7 320 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 SCARF2Q96GP6 870 aaPredicted RBP18.33■□□□□ 0.53
SSBP3-216ENST00000610401 FOXQ1Q9C009 403 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 TREM1Q9NP99 234 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 FAM96BQ9Y3D0 163 aa18.33■□□□□ 0.53
SSBP3-216ENST00000610401 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 OR6C76A6NM76 312 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 SLC18B1Q6NT16 456 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 OR5D18Q8NGL1 313 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 OR10R2Q8NGX6 335 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 GPX8Q8TED1 209 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 CCDC107Q8WV48 283 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 CMTM3Q96MX0 182 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 OR8B4Q96RC9 309 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF587Q96SQ5 575 aaPredicted RBP18.33■□□□□ 0.52
SSBP3-216ENST00000610401 GSKIPQ9P0R6 139 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 CLDN16Q9Y5I7 305 aa18.33■□□□□ 0.52
SSBP3-216ENST00000610401 TMEM269A0A1B0GVZ9 245 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 LOC107986453A0A1B0GWG9 222 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 PNMTP11086 282 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 AKT2P31751 481 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ACTBP60709 375 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ACTG1P63261 375 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 DLX2Q07687 328 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-216ENST00000610401 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF101Q8IZC7 436 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms