RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 TAS2R41P59536 307 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 BTG1P62324 171 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 RELBQ01201 579 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 SLC3A1Q07837 685 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 CDK5R2Q13319 367 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 HLXQ14774 488 aaPredicted RBP7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 DEFB112Q30KQ8 113 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 NRN1LQ496H8 165 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 RABL3Q5HYI8 236 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 FAM27BQ5VT28 67 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 DPPA2Q7Z7J5 298 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 LRRC28Q86X40 367 aaPredicted RBP7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 KLHL36Q8N4N3 616 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 ZNF283Q8N7M2 679 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 SLC26A7Q8TE54 656 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 TMEM239Q8WW34 195 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 SLC25A28Q96A46 364 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 TLCD1Q96CP7 247 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 CMBLQ96DG6 245 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 MPP4Q96JB8 637 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 OR2V2Q96R30 315 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 DIRC2Q96SL1 478 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 CGREF1Q99674 301 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 KAT8Q9H7Z6 458 aaKnown RBP7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 WDR76Q9H967 626 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 TMBIM4Q9HC24 238 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 GMPR2Q9P2T1 348 aaKnown RBP7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 RHCGQ9UBD6 479 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 RIMS3Q9UJD0 308 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 RAB21Q9UL25 225 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 GMEB1Q9Y692 573 aa7.24□□□□□ -1.25
SHKBP1-220ENST00000599716 PPIAL4EA0A075B759 164 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PPIAL4CA0A0B4J2A2 164 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PPIAL4DF5H284 164 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 TMEM178BH3BS89 294 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 TGDSO95455 350 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 ADH4P08319 380 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 DBHP09172 617 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 WNT2P09544 360 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PPIAL4FP0DN26 164 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 IFI30P13284 250 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 HTR5AP47898 357 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 GZMMP51124 257 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 CTXN1P60606 82 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 IL13RA1P78552 427 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PAX2Q02962 417 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PAX8Q06710 450 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 SF3A3Q12874 501 aaKnown RBP eCLIP7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 NFYCQ13952 458 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 VMACQ2NL98 169 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 ESCO2Q56NI9 601 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 ALG10Q5BKT4 473 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 LYPD2Q6UXB3 125 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PATL1Q86TB9 770 aaKnown RBP7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 SPICQ8N5J4 248 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 POU5F2Q8N7G0 328 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 BHLHE23Q8NDY6 225 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 OR13C2Q8NGS9 318 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 OR51A7Q8NH64 312 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 WFDC12Q8WWY7 111 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 C7orf26Q96N11 449 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 GPA33Q99795 319 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 CCDC28BQ9BUN5 200 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 CDADC1Q9BWV3 514 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 SLC19A3Q9BZV2 496 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PCDHAC1Q9H158 963 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 TXNIPQ9H3M7 391 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 RERGLQ9H628 205 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PTTG3PQ9NZH4 202 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 OR5V1Q9UGF6 321 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 ZDHHC8Q9ULC8 765 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 CORO2BQ9UQ03 480 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 PPP1R3CQ9UQK1 317 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 NDUFAF1Q9Y375 327 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 TIMM10BQ9Y5J6 103 aa7.23□□□□□ -1.25
SHKBP1-220ENST00000599716 A8MXK9 166 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 F5H5P2 479 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 J3KTA2 159 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 FBP2O00757 339 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 ANGPT2O15123 496 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 DOK2O60496 412 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 SFTPBP07988 381 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 CST2P09228 141 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 TSPAN19P0C672 248 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 RPS2P15880 293 aaKnown RBP7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 RPL27P61353 136 aaKnown RBP7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 FHL1Q13642 323 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 TMEM155Q4W5P6 130 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 OR2T2Q6IF00 324 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 C16orf87Q6PH81 154 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 FIP1L1Q6UN15 594 aaKnown RBP7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 RHOUQ7L0Q8 258 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 MOGAT3Q86VF5 341 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 KLBQ86Z14 1044 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 ALDH16A1Q8IZ83 802 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 ZNF454Q8N9F8 522 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 ATG16L2Q8NAA4 619 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 LRRC75AQ8NAA5 344 aa7.22□□□□□ -1.25
SHKBP1-220ENST00000599716 OR10S1Q8NGN2 331 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms