RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ZNF525Q8N782 197 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 OR10H5Q8NGA6 315 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 SYT3Q9BQG1 590 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 RHNO1Q9BSD3 238 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 REG4Q9BYZ8 158 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 RAB1BQ9H0U4 201 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 FN3KQ9H479 309 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 MYEF2Q9P2K5 600 aaKnown RBP14.37□□□□□ -0.11
SSBP4-204ENST00000597724 ASH2LQ9UBL3 628 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 EIF3KQ9UBQ5 218 aaKnown RBP14.37□□□□□ -0.11
SSBP4-204ENST00000597724 FZR1Q9UM11 496 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 BAIAP2Q9UQB8 552 aa14.37□□□□□ -0.11
SSBP4-204ENST00000597724 TLN2Q9Y4G6 2542 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 IGLV3-9A0A075B6K5 115 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 RNF223E7ERA6 249 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 SGCEO43556 437 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 ICMTO60725 284 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 E2F6O75461 281 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 CLPTM1O96005 669 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 TFP02787 698 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 ZNF250P15622 560 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 HIST1H3AP68431 136 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 GLO1Q04760 184 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 MEP1BQ16820 701 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 SLC36A3Q495N2 470 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 HIST2H3PS2Q5TEC6 136 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 C1orf146Q5VVC0 180 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 HIST2H3AQ71DI3 136 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 ASRGL1Q7L266 308 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 VASH1Q7L8A9 365 aaPredicted RBP14.36□□□□□ -0.11
SSBP4-204ENST00000597724 HS3ST5Q8IZT8 346 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 CYB561A3Q8NBI2 242 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 OR2T33Q8NG76 320 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 OR4Q3Q8NH05 313 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 MS4A5Q9H3V2 200 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 ARMC1Q9NVT9 282 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 DUSP13Q9UII6 198 aa14.36□□□□□ -0.11
SSBP4-204ENST00000597724 NDRG4Q9ULP0 352 aaKnown RBP14.36□□□□□ -0.11
SSBP4-204ENST00000597724 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 M0R233 179 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 DOK2O60496 412 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 TIPRLO75663 272 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 ANXA8P13928 327 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 PRKACGP22612 351 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 KLF3P57682 345 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-204ENST00000597724 SELENOVP59797 346 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 CCDC92Q53HC0 331 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-204ENST00000597724 UNQ6126/PRO20091Q6UXV3 157 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-204ENST00000597724 C1orf174Q8IYL3 243 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 SLC37A3Q8NCC5 494 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 ICA1LQ8NDH6 482 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 OR1J1Q8NGS3 322 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 SYNPRQ8TBG9 265 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 FAM168AQ92567 244 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 UTP4Q969X6 686 aaKnown RBP14.35□□□□□ -0.11
SSBP4-204ENST00000597724 PLEK2Q9NYT0 353 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 KLHL21Q9UJP4 597 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 NSD1Q96L73 2696 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-204ENST00000597724 CSPG4Q6UVK1 2322 aa14.35□□□□□ -0.11
SSBP4-204ENST00000597724 OR6C6A6NF89 314 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 FAM171A2A8MVW0 826 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 H3BN98 237 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 RER1O15258 196 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 DEAF1O75398 565 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-204ENST00000597724 NGFP01138 241 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 CSF3P09919 207 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 HTR5AP47898 357 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 ARHGDIAP52565 204 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 TEKQ02763 1124 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 CCNIQ14094 377 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-204ENST00000597724 ARL9Q6T311 187 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 CCDC121Q6ZUS5 278 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 GJC3Q8NFK1 279 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 OR2T4Q8NH00 348 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 TEX47Q8TBZ9 253 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 NEU4Q8WWR8 484 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-204ENST00000597724 NRBF2Q96F24 287 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 DUS3LQ96G46 650 aaKnown RBP14.34□□□□□ -0.11
SSBP4-204ENST00000597724 C4orf45Q96LM5 186 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 RBM4Q9BWF3 364 aaKnown RBP14.34□□□□□ -0.11
SSBP4-204ENST00000597724 NMNAT2Q9BZQ4 307 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 ZNF556Q9HAH1 456 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 ELOVL3Q9HB03 270 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 ATPIF1Q9UII2 106 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 POLR1DQ9Y2S0 133 aa14.34□□□□□ -0.11
SSBP4-204ENST00000597724 CHD3Q12873 2000 aaKnown RBP14.34□□□□□ -0.11
SSBP4-204ENST00000597724 LY6G6DO95868 133 aa14.33□□□□□ -0.12
SSBP4-204ENST00000597724 IGHV3-13P01766 116 aa14.33□□□□□ -0.12
SSBP4-204ENST00000597724 HLA-DQA2P01906 255 aa14.33□□□□□ -0.12
SSBP4-204ENST00000597724 ERCC1P07992 297 aaPredicted RBP14.33□□□□□ -0.12
SSBP4-204ENST00000597724 SLC25A16P16260 332 aa14.33□□□□□ -0.12
SSBP4-204ENST00000597724 PYCR1P32322 319 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms