RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 RIIAD1A6NNX1 92 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 G3V2T6 193 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 RER1O15258 196 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 SGCEO43556 437 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 DOK2O60496 412 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 GYPBP06028 91 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 CLUP10909 449 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 PSKH1P11801 424 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 ZNF23P17027 643 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 APLNRP35414 380 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 GLRXP35754 106 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 ERVS71-1P61550 626 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 CDK5Q00535 292 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 TEKQ02763 1124 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 SCRN3Q0VDG4 424 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 EFNB3Q15768 340 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 CCDC92Q53HC0 331 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-204ENST00000596348 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 TMEM236Q5W0B7 351 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 SLC27A4Q6P1M0 643 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 CORO6Q6QEF8 472 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 HIST2H3AQ71DI3 136 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 HIPK1Q86Z02 1210 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 TGIF2LYQ8IUE0 185 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 ZNF101Q8IZC7 436 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 PARP8Q8N3A8 854 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 SVOPLQ8N434 492 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 OR1J2Q8NGS2 313 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 OR2T4Q8NH00 348 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 DNAJC9Q8WXX5 260 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 CENPNQ96H22 339 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-204ENST00000596348 PKP2Q99959 881 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 WACQ9BTA9 647 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 MRPL37Q9BZE1 423 aaKnown RBP12.9□□□□□ -0.34
SCN1B-204ENST00000596348 PLK3Q9H4B4 646 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 MED20Q9H944 212 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 FZR1Q9UM11 496 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 OAZ3Q9UMX2 235 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 POLR1DQ9Y2S0 133 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
SCN1B-204ENST00000596348 OR6C6A6NF89 314 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 FAM183AA6NL82 134 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 B9A039 149 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 H7C417 338 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 SYNGR3O43761 229 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 IFNGP01579 166 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 ZNF3P17036 446 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 SPI1P17947 270 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 CCNOP22674 350 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 PCSK6P29122 969 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 EPHA2P29317 976 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 GGT2P36268 569 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 HTR5AP47898 357 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 GDI2P50395 445 aaKnown RBP12.89□□□□□ -0.35
SCN1B-204ENST00000596348 SLC25A1P53007 311 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 SHEQ5VZ18 495 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 KDM4DQ6B0I6 523 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 LRP11Q86VZ4 500 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 ZDHHC13Q8IUH4 622 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 LURAP1LQ8IV03 231 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 ALDH16A1Q8IZ83 802 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 SLC7A6Q92536 515 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
SCN1B-204ENST00000596348 TRMT61AQ96FX7 289 aaKnown RBP12.89□□□□□ -0.35
SCN1B-204ENST00000596348 RAB3IPQ96QF0 476 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-204ENST00000596348 DOK1Q99704 481 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 SLC25A19Q9HC21 320 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-204ENST00000596348 CMAHPQ9Y471 501 aa12.89□□□□□ -0.35
SCN1B-204ENST00000596348 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 SAC3D1A6NKF1 404 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 SURF4O15260 269 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 COX5BP10606 129 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 CRISP1P54107 249 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 UCP2P55851 309 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 RPS23P62266 143 aaKnown RBP12.88□□□□□ -0.35
SCN1B-204ENST00000596348 SNRPD2P62316 118 aaKnown RBP12.88□□□□□ -0.35
SCN1B-204ENST00000596348 LINC01590Q5TEZ4 76 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 SLC18B1Q6NT16 456 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 ZFP1Q6P2D0 407 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 RFPL4BQ6ZWI9 263 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 PTP4A1Q93096 173 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 SYT3Q9BQG1 590 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 KRT84Q9NSB2 600 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 PLEK2Q9NYT0 353 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
SCN1B-204ENST00000596348 CYB5R1Q9UHQ9 305 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
SCN1B-204ENST00000596348 ICMTO60725 284 aa12.87□□□□□ -0.35
SCN1B-204ENST00000596348 NGFP01138 241 aa12.87□□□□□ -0.35
SCN1B-204ENST00000596348 LCKP06239 509 aa12.87□□□□□ -0.35
SCN1B-204ENST00000596348 DBHP09172 617 aa12.87□□□□□ -0.35
SCN1B-204ENST00000596348 RPS27P42677 84 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms