RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 FBLIM1Q8WUP2 373 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 TRUB1Q8WWH5 349 aaKnown RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 NRGNQ92686 78 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 TFAP2CQ92754 450 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ZMYND19Q96E35 227 aaPredicted RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 PIK3IP1Q96FE7 263 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ZNF582Q96NG8 517 aaPredicted RBP9.15□□□□□ -0.94
LIG1-210ENST00000596332 OR51V1Q9H2C8 321 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 C8orf4Q9NR00 106 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 HAO2Q9NYQ3 351 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ASH2LQ9UBL3 628 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 ENOPH1Q9UHY7 261 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 MOKQ9UQ07 419 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 KLHDC2Q9Y2U9 406 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 TIMM10BQ9Y5J6 103 aa9.15□□□□□ -0.94
LIG1-210ENST00000596332 RAI1Q7Z5J4 1906 aaPredicted RBP9.15□□□□□ -0.95
LIG1-210ENST00000596332 POLQO75417 2590 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 C5orf63A6NC05 138 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 E7EQL1 145 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 H0YJX3 145 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 ZNF593O00488 134 aaPredicted RBP9.14□□□□□ -0.95
LIG1-210ENST00000596332 ABCD4O14678 606 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 CASKO14936 926 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 ICMTO60725 284 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 ENTPD6O75354 484 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 GOSR1O95249 250 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 PAX7P23759 505 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 PTAFRP25105 342 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 FMO3P31513 532 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 WNT5AP41221 380 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 AQP4P55087 323 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 AQP6Q13520 282 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 GGTLC2Q14390 218 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 SLC36A2Q495M3 483 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 SLC35D3Q5M8T2 416 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 FBXW10Q5XX13 1052 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 DNM1P34Q6PK57 102 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 DPPA2Q7Z7J5 298 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 PROKR2Q8NFJ6 384 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 KBTBD8Q8NFY9 601 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 FAM81AQ8TBF8 368 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 SLC7A6Q92536 515 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 ZNF649Q9BS31 505 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 WACQ9BTA9 647 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 ROS1P08922 2347 aa9.14□□□□□ -0.95
LIG1-210ENST00000596332 TMEM129A0AVI4 362 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 C12orf71A8MTZ7 269 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 ATP6V1G2-DDX39BF2Z307 99 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 H0YHG0 523 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 FARS2O95363 451 aaKnown RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 CD8AP01732 235 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 DBHP09172 617 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 DANCRP0C864 163 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 COX5BP10606 129 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 ALOX5APP20292 161 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 OTX1P32242 354 aaPredicted RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 CAPZA2P47755 286 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 CENPAP49450 140 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 SMN1Q16637 294 aaKnown RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 MST1LQ2TV78 715 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 ZNF684Q5T5D7 378 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 TMEM108Q6UXF1 575 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 ZNF704Q6ZNC4 412 aaPredicted RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 COLCA1Q6ZS62 124 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 DPY19L4Q7Z388 723 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 NAA40Q86UY6 237 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 RFLNBQ8N5W9 214 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 ADI1Q9BV57 179 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 ESRP2Q9H6T0 727 aaKnown RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 ADGRL4Q9HBW9 690 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 DNAJC27Q9NZQ0 273 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 KCNG2Q9UJ96 466 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 GDF2Q9UK05 429 aaPredicted RBP9.13□□□□□ -0.95
LIG1-210ENST00000596332 COPS3Q9UNS2 423 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 GMPPBQ9Y5P6 360 aa9.13□□□□□ -0.95
LIG1-210ENST00000596332 H0YAE9 185 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 SGCEO43556 437 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 NGFP01138 241 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 NR4A1P22736 598 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 STOMP27105 288 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 SSTR2P30874 369 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 HTR1FP30939 366 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 SLC15A1P46059 708 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 ENTPD1P49961 510 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 NR1H2P55055 460 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 CDC42P60953 191 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 ADAM8P78325 824 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 MAD2L1BPQ15013 274 aaPredicted RBP9.12□□□□□ -0.95
LIG1-210ENST00000596332 ZNF672Q499Z4 452 aaPredicted RBP9.12□□□□□ -0.95
LIG1-210ENST00000596332 KLHL12Q53G59 568 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 TMEM53Q6P2H8 277 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 PRSS45Q7RTY3 260 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 ZNF101Q8IZC7 436 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 DHRSXQ8N5I4 330 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms