RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GALP22466 123 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 HTR3AP46098 478 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 GZMKP49863 264 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ACTC1P68032 377 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ACTA1P68133 377 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 GPR50Q13585 617 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF404Q494X3 552 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 LCN1P1Q5VSP4 162 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF322Q6U7Q0 402 aaPredicted RBP11.24□□□□□ -0.61
SCAF1-202ENST00000595242 BEND4Q6ZU67 534 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 SHFQ7M4L6 423 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 GRINAQ7Z429 371 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 DTX2Q86UW9 622 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 LSRQ86X29 649 aaPredicted RBP11.24□□□□□ -0.61
SCAF1-202ENST00000595242 MFSD4AQ8N468 514 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF525Q8N782 197 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 POMGNT2Q8NAT1 580 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 OR6K3Q8NGY3 331 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 STK35Q8TDR2 534 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ST8SIA1Q92185 356 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 FAM168AQ92567 244 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 UFD1Q92890 307 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 S100PBPQ96BU1 408 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 MED20Q9H944 212 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 HMG20AQ9NP66 347 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 FAIMQ9NVQ4 179 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 CISD1Q9NZ45 108 aaKnown RBP11.24□□□□□ -0.61
SCAF1-202ENST00000595242 SSR3Q9UNL2 185 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 EMC9Q9Y3B6 208 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 IER3IP1Q9Y5U9 82 aa11.24□□□□□ -0.61
SCAF1-202ENST00000595242 SPIN1Q9Y657 262 aaPredicted RBP11.24□□□□□ -0.61
SCAF1-202ENST00000595242 ARFGEF3Q5TH69 2177 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 A0A075B6Q4 140 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 A0A0G2JK05 382 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 LOC100506127A0A0U1RQW1 187 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 C12orf71A8MTZ7 269 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 SEC14L5O43304 696 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 SCO2O43819 266 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 AQP8O94778 261 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 APOL3O95236 402 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 CD14P08571 375 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
SCAF1-202ENST00000595242 PSMB1P20618 241 aaKnown RBP11.23□□□□□ -0.61
SCAF1-202ENST00000595242 USF1P22415 310 aaPredicted RBP11.23□□□□□ -0.61
SCAF1-202ENST00000595242 CXCR1P25024 350 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 FGF9P31371 208 aaPredicted RBP11.23□□□□□ -0.61
SCAF1-202ENST00000595242 GABRA5P31644 462 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 SLC25A1P53007 311 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 BSPH1Q075Z2 132 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 LGALS3BPQ08380 585 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 C17orf67Q0P5P2 114 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 GALEQ14376 348 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 QPRTQ15274 297 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 TOMM34Q15785 309 aaPredicted RBP11.23□□□□□ -0.61
SCAF1-202ENST00000595242 SLC25A53Q5H9E4 307 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 LIPKQ5VXJ0 399 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 C3orf56Q8N813 242 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 TMEM99Q8N816 258 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 NPEPL1Q8NDH3 523 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 OR52E2Q8NGJ4 325 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 MOSPD2Q8NHP6 518 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 TMEM234Q8WY98 164 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 HTRA1Q92743 480 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
SCAF1-202ENST00000595242 MOGAT1Q96PD6 335 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 SNX18Q96RF0 628 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 NGBQ9NPG2 151 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 NANSQ9NR45 359 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 ASB6Q9NWX5 421 aa11.23□□□□□ -0.61
SCAF1-202ENST00000595242 TMED7-TICAM2A0A0A6YYA0 188 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 A8MVM7 634 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 B4DXG7 233 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 LALBAP00709 142 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 PLGP00747 810 aaPredicted RBP11.22□□□□□ -0.61
SCAF1-202ENST00000595242 IL1AP01583 271 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 FCGR2AP12318 317 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 IL11P20809 199 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 SDHAP31040 664 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 RPL4P36578 427 aaKnown RBP11.22□□□□□ -0.61
SCAF1-202ENST00000595242 RPS3AP61247 264 aaKnown RBP11.22□□□□□ -0.61
SCAF1-202ENST00000595242 SGCBQ16585 318 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 ALG10Q5BKT4 473 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 GPR139Q6DWJ6 353 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 NANOGNBQ7Z5D8 188 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 ADGRG3Q86Y34 549 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 SDR9C7Q8NEX9 313 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 STEAP2Q8NFT2 490 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 SPRYD4Q8WW59 207 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms