RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 LEG1Q6P5S2 330 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 DNM1P34Q6PK57 102 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 JAZF1Q86VZ6 243 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 ZNF786Q8N393 782 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 LINC00471Q8N535 108 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 ZNF540Q8NDQ6 660 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 UBASH3BQ8TF42 649 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 SNX33Q8WV41 574 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 LRGUKQ96M69 825 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 THTPAQ9BU02 230 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 VNN3Q9NY84 501 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 SLCO1C1Q9NYB5 712 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 TAAR3PQ9P1P4 343 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
TRIM28-205ENST00000595028 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
TRIM28-205ENST00000595028 IGLV1-36A0A0B4J1U3 117 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 DCTN6O00399 190 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 ACOT8O14734 319 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 SGCEO43556 437 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 NCR1O76036 304 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 CCNB2O95067 398 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 HPXP02790 462 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 GAAP10253 952 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 HIST1H1CP16403 213 aaKnown RBP12.92□□□□□ -0.34
TRIM28-205ENST00000595028 ZNF16P17020 682 aaPredicted RBP12.92□□□□□ -0.34
TRIM28-205ENST00000595028 CRABP1P29762 137 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 HTR5AP47898 357 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 LSM6P62312 80 aaKnown RBP12.92□□□□□ -0.34
TRIM28-205ENST00000595028 GLO1Q04760 184 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 ALKBH6Q3KRA9 238 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 DNAL1Q4LDG9 190 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 OTPQ5XKR4 325 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 OR2T5Q6IEZ7 315 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 RPL13AP3Q6NVV1 102 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 PGM2L1Q6PCE3 622 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
TRIM28-205ENST00000595028 OR52L1Q8NGH7 329 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 OR2T29Q8NH02 315 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 OR4K13Q8NH42 304 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 ABHD4Q8TB40 342 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
TRIM28-205ENST00000595028 TSSK2Q96PF2 358 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 NMNAT3Q96T66 252 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 RACGAP1Q9H0H5 632 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 EGLN3Q9H6Z9 239 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 REEP1Q9H902 201 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 GPR160Q9UJ42 338 aa12.92□□□□□ -0.34
TRIM28-205ENST00000595028 SAMHD1Q9Y3Z3 626 aaKnown RBP12.92□□□□□ -0.34
TRIM28-205ENST00000595028 H3BSA7 217 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 IDH3BO43837 385 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 MPZL1O95297 269 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 RENP00797 406 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 IGHV3-13P01766 116 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 IGHV4-31P0DP07 118 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 RAP2AP10114 183 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 NOS3P29474 1203 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 PPP1CBP62140 327 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 TRAP1Q12931 704 aaKnown RBP12.91□□□□□ -0.34
TRIM28-205ENST00000595028 PPP1R8Q12972 351 aaKnown RBP12.91□□□□□ -0.34
TRIM28-205ENST00000595028 RIN1Q13671 783 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 KCNMB1Q16558 191 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 CLEC12AQ5QGZ9 265 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 ELFN2Q5R3F8 820 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 C1orf174Q8IYL3 243 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 ADGRG5Q8IZF4 528 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 AQP11Q8NBQ7 271 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 SDR9C7Q8NEX9 313 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
TRIM28-205ENST00000595028 C4orf45Q96LM5 186 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 PLA2G12AQ9BZM1 189 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 HINT3Q9NQE9 182 aaKnown RBP12.91□□□□□ -0.34
TRIM28-205ENST00000595028 RPRD1BQ9NQG5 326 aaKnown RBP12.91□□□□□ -0.34
TRIM28-205ENST00000595028 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 B9D1Q9UPM9 204 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 POLR1DQ9Y2S0 133 aa12.91□□□□□ -0.34
TRIM28-205ENST00000595028 OR6C6A6NF89 314 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 AQP12BA6NM10 295 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 C17orf100A8MU93 164 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 A8MV72 311 aaPredicted RBP12.9□□□□□ -0.34
TRIM28-205ENST00000595028 LYNX1G3V0Z9 82 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 BHLHE40O14503 412 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 ABHD16AO95870 558 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 GPANK1O95872 356 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 NGFP01138 241 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 LYNX1P0DP58 116 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 ZNF23P17027 643 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 GCH1P30793 250 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 MPV17P39210 176 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 MAGEB1P43366 347 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 GZMKP49863 264 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
TRIM28-205ENST00000595028 PCGF3Q3KNV8 242 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 TMEM255AQ5JRV8 349 aa12.9□□□□□ -0.34
TRIM28-205ENST00000595028 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms