RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 EMC7Q9NPA0 242 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 IL20RAQ9UHF4 553 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 FZR1Q9UM11 496 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 POLR1DQ9Y2S0 133 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 LYVE1Q9Y5Y7 322 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 CDH10Q9Y6N8 788 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 FBN3Q75N90 2809 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 TCRBV5S2A0A599 114 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 PLSCR5A0PG75 271 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 C17orf100A8MU93 164 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 J3QW42 95 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 TACSTD2P09758 323 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 GSTM3P21266 225 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 HTR5AP47898 357 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 TEKQ02763 1124 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 GLO1Q04760 184 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 MAD2L1BPQ15013 274 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 DNAL1Q4LDG9 190 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 MBNL2Q5VZF2 373 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 ZNF774Q6NX45 483 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 PGBD2Q6P3X8 592 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 RINLQ6ZS11 566 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 ZNF101Q8IZC7 436 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 ABHD4Q8TB40 342 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 C4orf45Q96LM5 186 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 NUAK2Q9H093 628 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 RACGAP1Q9H0H5 632 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 RERGLQ9H628 205 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 REEP1Q9H902 201 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 TBCCD1Q9NVR7 557 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 FAM53CQ9NYF3 392 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 PLEK2Q9NYT0 353 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 MYEF2Q9P2K5 600 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 LPAR3Q9UBY5 353 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 CDC42EP3Q9UKI2 254 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 COA3Q9Y2R0 106 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 ABCA1O95477 2261 aa15.19■□□□□ 0.02
SHKBP1-204ENST00000594862 CCNB2O95067 398 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 ABHD16AO95870 558 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 T-ENOLP0DO92 83 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 IGHV4-31P0DP07 118 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 NAT2P11245 290 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 WNT5AP41221 380 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 PPP1CBP62140 327 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 TRAP1Q12931 704 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 RIN1Q13671 783 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 SLC36A3Q495N2 470 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 FAM166AQ6J272 317 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 LEG1Q6P5S2 330 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 PTCHD4Q6ZW05 846 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 TRPM8Q7Z2W7 1104 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 HIPK1Q86Z02 1210 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 BCAS4Q8TDM0 211 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 MARS2Q96GW9 593 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 DCLRE1CQ96SD1 692 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 TAS2R1Q9NYW7 299 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 ASH2LQ9UBL3 628 aa15.18■□□□□ 0.02
SHKBP1-204ENST00000594862 CHD3Q12873 2000 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 IGHV4-61A0A0C4DH41 118 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 CLPTM1O96005 669 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 RAP2AP10114 183 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 ZNF16P17020 682 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 CDKN2AP42771 156 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 RGS6P49758 472 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 TMEM33P57088 247 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 ERVS71-1P61550 626 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 CHRFAM7AQ494W8 412 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 ELFN2Q5R3F8 820 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 OR2T5Q6IEZ7 315 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 RFPL4BQ6ZWI9 263 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 VASH1Q7L8A9 365 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 GJC3Q8NFK1 279 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 OR2T29Q8NH02 315 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 SLC25A40Q8TBP6 338 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 CCDC124Q96CT7 223 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 SAMD8Q96LT4 415 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 DIRC2Q96SL1 478 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 HDHD2Q9H0R4 259 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 BAIAP2Q9UQB8 552 aa15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 SAMHD1Q9Y3Z3 626 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-204ENST00000594862 IGLV1-36A0A0B4J1U3 117 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 OR6C6A6NF89 314 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 AQP12BA6NM10 295 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 HPXP02790 462 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 GPR6P46095 362 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 CENPAP49450 140 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 RASSF6Q6ZTQ3 369 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 AQP12AQ8IXF9 295 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 OR4C15Q8NGM1 316 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 KLF14Q8TD94 323 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 NMNAT3Q96T66 252 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 OR2J1Q9GZK6 312 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 DECR2Q9NUI1 292 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 IL20Q9NYY1 176 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 KCNG2Q9UJ96 466 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 ZDHHC8Q9ULC8 765 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 COL6A5A8TX70 2615 aa15.16■□□□□ 0.02
SHKBP1-204ENST00000594862 GYG2O15488 501 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 IFNA2P01563 188 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms