RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MSR1P21757 451 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 GATA3P23771 443 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 SLC6A9P48067 706 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 ZNF154Q13106 437 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 KLF10Q13118 480 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 TAF11Q15544 211 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 PRR31Q5SQ13 230 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 TBPL2Q6SJ96 375 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 VASH1Q7L8A9 365 aaPredicted RBP8.96□□□□□ -0.98
USE1-203ENST00000593597 OFCC1Q8IZS5 231 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 SGMS2Q8NHU3 365 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 ITLN1Q8WWA0 313 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 Q96M85 177 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 JMJD8Q96S16 334 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 ZNF747Q9BV97 191 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 KCNN2Q9H2S1 579 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 PATZ1Q9HBE1 687 aaKnown RBP8.96□□□□□ -0.98
USE1-203ENST00000593597 CYSLTR2Q9NS75 346 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 CMTM6Q9NX76 183 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 STX18Q9P2W9 335 aaKnown RBP8.96□□□□□ -0.98
USE1-203ENST00000593597 EIF3KQ9UBQ5 218 aaKnown RBP8.96□□□□□ -0.98
USE1-203ENST00000593597 ZDHHC8Q9ULC8 765 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 TIMM10BQ9Y5J6 103 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 INSIG2Q9Y5U4 225 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 DOK2O60496 412 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 FOXH1O75593 365 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 ABHD16AO95870 558 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 DBHP09172 617 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 IGHV4-38-2P0DP08 117 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 COX5BP10606 129 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 CTLA4P16410 223 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 GPR4P46093 362 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 MMP16P51512 607 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 FXYD6P3P58550 94 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 BTG1P62324 171 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 HOXA4Q00056 320 aaPredicted RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 PRKCDQ05655 676 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 ST3GAL3Q11203 375 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 CYLC2Q14093 348 aaPredicted RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 TMEM155Q4W5P6 130 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 CCDC92Q53HC0 331 aaPredicted RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 COQ5Q5HYK3 327 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 METTL21CQ5VZV1 264 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 JAZF1Q86VZ6 243 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 LRRC28Q86X40 367 aaPredicted RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 TEX29Q8N6K0 151 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 OR2Z1Q8NG97 314 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 POP5Q969H6 163 aaKnown RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 RASD2Q96D21 266 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 TPD52L3Q96J77 140 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 RBP7Q96R05 134 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 ECSITQ9BQ95 431 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 EGLN1Q9GZT9 426 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 SAR1AQ9NR31 198 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 TBCCD1Q9NVR7 557 aa8.95□□□□□ -0.98
USE1-203ENST00000593597 CGGBP1Q9UFW8 167 aaPredicted RBP8.95□□□□□ -0.98
USE1-203ENST00000593597 IGHV3OR16-10A0A075B7F0 116 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 MDFIC2A0A1B0GVS7 189 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 GMNCA6NCL1 334 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 OR6C6A6NF89 314 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 CEACAM18A8MTB9 384 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 HMGB1P1B2RPK0 211 aaPredicted RBP8.94□□□□□ -0.98
USE1-203ENST00000593597 H0YL77 283 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 MLNRO43193 412 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 SASH3O75995 380 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 ZNF205O95201 554 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 GPANK1O95872 356 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 PRTN3P24158 256 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 CD80P33681 288 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 LIPAP38571 399 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 HTR5AP47898 357 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 SELENOWP63302 87 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 SLC3A1Q07837 685 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 ARMCX4Q5H9R4 360 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 FAM205BPQ63HN1 556 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 ERICH5Q6P6B1 374 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 SYT9Q86SS6 491 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 OR5AS1Q8N127 324 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 FAM156AQ8NDB6 213 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 OR2T12Q8NG77 320 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 ZNF420Q8TAQ5 688 aaPredicted RBP8.94□□□□□ -0.98
USE1-203ENST00000593597 ST7LQ8TDW4 575 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 CMBLQ96DG6 245 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 SAMD8Q96LT4 415 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 OR2V2Q96R30 315 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 ELOVL3Q9HB03 270 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 NTN4Q9HB63 628 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 PLEK2Q9NYT0 353 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 NUP50Q9UKX7 468 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 NDRG4Q9ULP0 352 aaKnown RBP8.94□□□□□ -0.98
USE1-203ENST00000593597 AUP1Q9Y679 476 aa8.94□□□□□ -0.98
USE1-203ENST00000593597 TEX13CA0A0J9YWL9 993 aa8.93□□□□□ -0.98
USE1-203ENST00000593597 IGHV3-64DA0A0J9YX35 117 aa8.93□□□□□ -0.98
USE1-203ENST00000593597 LOC100653049A0A140TA62 436 aa8.93□□□□□ -0.98
USE1-203ENST00000593597 A6NIZ1 184 aa8.93□□□□□ -0.98
USE1-203ENST00000593597 BBIP1A8MTZ0 92 aa8.93□□□□□ -0.98
USE1-203ENST00000593597 C12orf71A8MTZ7 269 aa8.93□□□□□ -0.98
USE1-203ENST00000593597 EFCAB9A8MZ26 197 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms