RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 C1QTNF12Q5T7M4 302 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 CGB2Q6NT52 195 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 ZNF730Q6ZMV8 503 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 CCDC80Q76M96 950 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 SLC16A14Q7RTX9 510 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 HDDC2Q7Z4H3 204 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 MEX3DQ86XN8 651 aaKnown RBP7.1□□□□□ -1.27
DNMT1-219ENST00000589349 ZCCHC24Q8N2G6 241 aaKnown RBP7.1□□□□□ -1.27
DNMT1-219ENST00000589349 SLC22A24Q8N4F4 322 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 OR4K5Q8NGD3 323 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 OR6X1Q8NH79 312 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 IGFBPL1Q8WX77 278 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 CMTM5Q96DZ9 223 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 SLC25A44Q96H78 314 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-219ENST00000589349 LRR1Q96L50 414 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 ZNF583Q96ND8 569 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 SLC19A3Q9BZV2 496 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 LRMDAQ9H2I8 198 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 TPK1Q9H3S4 243 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 RERGLQ9H628 205 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 CHODLQ9H9P2 273 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 CDH20Q9HBT6 801 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 CCNB1IP1Q9NPC3 277 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 TAS2R5Q9NYW4 299 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 V9GYQ6 96 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 ALPK2Q86TB3 2170 aa7.1□□□□□ -1.27
DNMT1-219ENST00000589349 AKAP9Q99996 3911 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 A8MV72 311 aaPredicted RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 EFCAB9A8MZ26 197 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 H7C417 338 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 FXYD1O00168 92 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 DHHO43323 396 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 PIP5K1CO60331 668 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SCGB1D2O95969 90 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SERPINA1P01009 418 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 THY1P04216 161 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 CCL2P13500 99 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 APEHP13798 732 aaKnown RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 DAOP14920 347 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SLC25A16P16260 332 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 NCK1P16333 377 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 DRD4P21917 467 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 RBM34P42696 430 aaKnown RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 CENPAP49450 140 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 GZMMP51124 257 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SEC24CP53992 1094 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SELENOWP63302 87 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 KRT72Q14CN4 511 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 TAF11Q15544 211 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SLC36A2Q495M3 483 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 IFI44LQ53G44 452 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 ALG10Q5BKT4 473 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 CYB5R2Q6BCY4 276 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 C11orf71Q6IPW1 123 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 PIWIL3Q7Z3Z3 882 aaKnown RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 VTCN1Q7Z7D3 282 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 MYPOPQ86VE0 399 aaPredicted RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 IGFN1Q86VF2 1251 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 CALHM3Q86XJ0 350 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SKA3Q8IX90 412 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 RBM15BQ8NDT2 890 aaKnown RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 BEND2Q8NDZ0 799 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 OR51A7Q8NH64 312 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 MOSPD2Q8NHP6 518 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 FOXN4Q96NZ1 517 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 TNFRSF13CQ96RJ3 184 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 ZNF347Q96SE7 839 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 HOPXQ9BPY8 73 aaPredicted RBP7.09□□□□□ -1.27
DNMT1-219ENST00000589349 NDEL1Q9GZM8 345 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 NOX3Q9HBY0 568 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 C20orf141Q9NUB4 165 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 CMTM6Q9NX76 183 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 SLC45A2Q9UMX9 530 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 MTORP42345 2549 aa7.09□□□□□ -1.27
DNMT1-219ENST00000589349 MAP1AP78559 2803 aaPredicted RBP7.08□□□□□ -1.28
DNMT1-219ENST00000589349 RAI1Q7Z5J4 1906 aaPredicted RBP7.08□□□□□ -1.28
DNMT1-219ENST00000589349 TRGV11A0A075B6L2 103 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 TRAV27A0A087WT01 109 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 A0A1W2PPL8 197 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 J3KTA2 159 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 M0R233 179 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 NDUFAB1O14561 156 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 SLC22A2O15244 555 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 CD5LO43866 347 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 PTHP01270 115 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 IFNA2P01563 188 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 IGKV3-15P01624 115 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 IGLV1-44P01699 117 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 ASAH2BP0C7U1 165 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 ACADSP16219 412 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 CDAP32320 146 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 APLNRP35414 380 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 ALDH3B1P43353 468 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 PSME3P61289 254 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 RPS23P62266 143 aaKnown RBP7.08□□□□□ -1.28
DNMT1-219ENST00000589349 GNGT1P63211 74 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 ZP4Q12836 540 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 TRAM2Q15035 370 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 TBC1D28Q2M2D7 210 aa7.08□□□□□ -1.28
DNMT1-219ENST00000589349 TMEM249Q2WGJ8 235 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms