RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 TACSTD2P09758 323 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GPR6P46095 362 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CHN2P52757 468 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 PPP1CBP62140 327 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SYT9Q86SS6 491 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 OR4K13Q8NH42 304 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 FANK1Q8TC84 345 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 KLF14Q8TD94 323 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GNPDA2Q8TDQ7 276 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SNX33Q8WV41 574 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IPCEF1Q8WWN9 437 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IFT27Q9BW83 186 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 BEX2Q9BXY8 128 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 POFUT1Q9H488 388 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ZNF275Q9NSD4 429 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ACTR3BQ9P1U1 418 aa17.1■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TPD52L2O43399 206 aaKnown RBP17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 PPIHO43447 177 aaKnown RBP17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SGCEO43556 437 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SPRY3O43610 288 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 IGFBP5P24593 272 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 HTR5AP47898 357 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GSSP48637 474 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 MEP1BQ16820 701 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 SPATS1Q496A3 300 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 CCDC92Q53HC0 331 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 FAM166AQ6J272 317 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 C1orf94Q6P1W5 598 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 LEG1Q6P5S2 330 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GLB1L2Q8IW92 636 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 NMNAT3Q96T66 252 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 ASH2LQ9UBL3 628 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 KCNS2Q9ULS6 477 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 B9D1Q9UPM9 204 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 GRIP1Q9Y3R0 1128 aa17.09■□□□□ 0.33
TRAPPC6A-203ENST00000587818 TCRBV5S2A0A599 114 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 TNFRSF11BO00300 401 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 DOK2O60496 412 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 HIST1H1CP16403 213 aaKnown RBP17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 ACHEP22303 614 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 FPR3P25089 353 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 SLC6A6P31641 620 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 ZNF81P51508 661 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 SCRN3Q0VDG4 424 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 MOGQ16653 247 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 SLC35F1Q5T1Q4 408 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 VASH1Q7L8A9 365 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 ADCK1Q86TW2 530 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 OR6V1Q8N148 313 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 OR9Q2Q8NGE9 314 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CLPTM1LQ96KA5 538 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 SHARPINQ9H0F6 387 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 FN3KQ9H479 309 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 EGLN3Q9H6Z9 239 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 PLEK2Q9NYT0 353 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 TREM2Q9NZC2 230 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 STARD10Q9Y365 291 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CACNG2Q9Y698 323 aa17.08■□□□□ 0.32
TRAPPC6A-203ENST00000587818 RER1O15258 196 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 RP2O75695 350 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 ABHD16AO95870 558 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 IFNGR2P38484 337 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 HMGA2P52926 109 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 TSPAN31Q12999 210 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 HNRNPA0Q13151 305 aaKnown RBP17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 SPRNQ5BIV9 151 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 JAZF1Q86VZ6 243 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 DHFR2Q86XF0 187 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CLDND2Q8NHS1 167 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 ELOVL3Q9HB03 270 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 DECR2Q9NUI1 292 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 NDRG4Q9ULP0 352 aaKnown RBP17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 LYVE1Q9Y5Y7 322 aa17.07■□□□□ 0.32
TRAPPC6A-203ENST00000587818 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.07■□□□□ 0.322e-9■■■□□ 16.1
TRAPPC6A-203ENST00000587818 ARPC3O15145 178 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 RENP00797 406 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 GASTP01350 101 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 IGHV1-46P01743 117 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 DBHP09172 617 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 COX5BP10606 129 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CALB2P22676 271 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 RBMXP38159 391 aaKnown RBP17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 MMP15P51511 669 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 ARHGDIAP52565 204 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 TMEM33P57088 247 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 LSM6P62312 80 aaKnown RBP17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 MVKQ03426 396 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 AQP6Q13520 282 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 TRIM25Q14258 630 aaKnown RBP17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CLEC12AQ5QGZ9 265 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 FAM120AOSQ5T036 256 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 AVPI1Q5T686 147 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 MBNL2Q5VZF2 373 aaKnown RBP17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 CORO6Q6QEF8 472 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 UNQ6126/PRO20091Q6UXV3 157 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 USP51Q70EK9 711 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 OR52E2Q8NGJ4 325 aa17.06■□□□□ 0.32
TRAPPC6A-203ENST00000587818 OR1F12Q8NHA8 337 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms