RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 INTS12Q96CB8 462 aaKnown RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 JSRP1Q96MG2 331 aaPredicted RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 FOXN4Q96NZ1 517 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 NEDD4LQ96PU5 975 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 ABCG5Q9H222 651 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 MOB1AQ9H8S9 216 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 RNF121Q9H920 327 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 CKLFQ9UBR5 152 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 ING1Q9UK53 422 aaPredicted RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 OR52A1Q9UKL2 312 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 HHLA2Q9UM44 414 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 DHDHQ9UQ10 334 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 WDFY3Q8IZQ1 3526 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 TMEM8BA6NDV4 472 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 LINC01387J3KSC0 135 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 RAD1O60671 282 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 SRSF10O75494 262 aaKnown RBP10.03□□□□□ -0.8
LIG3-204ENST00000585740 FSTP19883 344 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 DLSTP36957 453 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 GUCA1AP43080 201 aaPredicted RBP10.03□□□□□ -0.8
LIG3-204ENST00000585740 CYB561P49447 251 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 MMP16P51512 607 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 AGFG1P52594 562 aaKnown RBP10.03□□□□□ -0.8
LIG3-204ENST00000585740 CAPZA1P52907 286 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 H3F3AP84243 136 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 Q0VFX4 171 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 CAMK2DQ13557 499 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 HIST3H3Q16695 136 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 HES5Q5TA89 166 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 ASB18Q6ZVZ8 466 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 SPATC1Q76KD6 591 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 SYT9Q86SS6 491 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 OR2AJ1Q8NGZ0 328 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 TRIM63Q969Q1 353 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 RELTQ969Z4 430 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 SLAMF6Q96DU3 332 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 S100A16Q96FQ6 103 aaKnown RBP10.03□□□□□ -0.8
LIG3-204ENST00000585740 GNRHR2Q96P88 292 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 GFI1Q99684 422 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 EMC6Q9BV81 110 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 SF3B5Q9BWJ5 86 aaKnown RBP10.03□□□□□ -0.8
LIG3-204ENST00000585740 STEAP1Q9UHE8 339 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 CYB5R1Q9UHQ9 305 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 GTF2A1LQ9UNN4 478 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
LIG3-204ENST00000585740 DOCK10Q96BY6 2186 aa10.02□□□□□ -0.8
LIG3-204ENST00000585740 IGKV1D-43A0A0B4J1Z2 117 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 A0A1B0GTH9 108 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 A0A1W2PPL8 197 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 MEIOCA2RUB1 952 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 ZNF878C9JN71 531 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 NPIPA2E9PIF3 369 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 NPIPA3F8WFD2 350 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 SSX4O60224 188 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 MPZL1O95297 269 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 CNR1P21554 472 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 KIR2DL3P43628 341 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 CSNK1A1P48729 337 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 EIF2B2P49770 351 aaKnown RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 ZNF133P52736 654 aaPredicted RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 ART1P52961 327 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 TPTEP56180 551 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 CLDN20P56880 219 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 LSM6P62312 80 aaKnown RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 MADCAM1Q13477 382 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 PDSS1Q5T2R2 415 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 BCL2L15Q5TBC7 163 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 RSBN1Q5VWQ0 802 aaPredicted RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 GLT8D1Q68CQ7 371 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 FCRLAQ7L513 359 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 MDGA2Q7Z553 956 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 CMTM4Q8IZR5 234 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 HAVCR1Q96D42 359 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 SMAD5Q99717 465 aaKnown RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 OR2B2Q9GZK3 357 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 LIN7BQ9HAP6 207 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 PLEKHA1Q9HB21 404 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 SLC17A5Q9NRA2 495 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 CENPMQ9NSP4 180 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 FOXJ2Q9P0K8 574 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 OR5V1Q9UGF6 321 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 BOKQ9UMX3 212 aaPredicted RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 WASF3Q9UPY6 502 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 SLC22A13Q9Y226 551 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 CACNG2Q9Y698 323 aa10.02□□□□□ -0.81
LIG3-204ENST00000585740 SETXQ7Z333 2677 aaKnown RBP10.02□□□□□ -0.81
LIG3-204ENST00000585740 A0A0B4J203 849 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 TMEM269A0A1B0GVZ9 245 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 TERTO14746 1132 aaKnown RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 EEF1E1O43324 174 aaKnown RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 ORC5O43913 435 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ECDO95905 644 aaPredicted RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 PNPP00491 289 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 OPN1LWP04000 364 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 QDPRP09417 244 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ADRA2CP18825 462 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 CD82P27701 267 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 HLA-DMAP28067 261 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 MAGEB1P43366 347 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms