RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 IL34Q6ZMJ4 242 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 COMMD1Q8N668 190 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 SLC38A9Q8NBW4 561 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 KLHDC9Q8NEP7 349 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 TMEM231Q9H6L2 316 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 C4orf47A7E2U8 309 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 MBP02144 154 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 ENPP1P22413 925 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 CD38P28907 300 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 HAGHQ16775 308 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 PLXDC2Q6UX71 529 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 MAP6Q96JE9 813 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 PIGQQ9BRB3 760 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 BANF2Q9H503 90 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 FLVCR2Q9UPI3 526 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 HSD17B6O14756 317 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 LIM2P55344 173 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 OLIG3Q7RTU3 272 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 ATF6BQ99941 703 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
RNF43-208ENST00000584437 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 DNMT3BQ9UBC3 853 aaKnown RBP11.94□□□□□ -0.5
RNF43-208ENST00000584437 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
RNF43-208ENST00000584437 SIGLEC1Q9BZZ2 1709 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 XRCC3O43542 346 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 IGFBP1P08833 259 aaPredicted RBP11.93□□□□□ -0.5
RNF43-208ENST00000584437 UBE2G2P60604 165 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 CCSMST1Q4G0I0 132 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 TCTN3Q6NUS6 607 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 OR2AE1Q8NHA4 323 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 SCO1O75880 301 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 TIMP1P01033 207 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 HIST1H1CP16403 213 aaKnown RBP11.93□□□□□ -0.5
RNF43-208ENST00000584437 SSR4P51571 173 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 SNRPNP63162 240 aaKnown RBP11.93□□□□□ -0.5
RNF43-208ENST00000584437 MRPS21P82921 87 aaKnown RBP11.93□□□□□ -0.5
RNF43-208ENST00000584437 ZNF90Q03938 601 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 TMEM179BQ7Z7N9 219 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 PTDSS2Q9BVG9 487 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 LTC4SQ16873 150 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 AFMIDQ63HM1 303 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 USP51Q70EK9 711 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 KIR3DX1Q9H7L2 352 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 NTNG1Q9Y2I2 539 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 AQP8O94778 261 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 OR10J4P0C629 311 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 SPP1P10451 314 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 ARRB2P32121 409 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 APOBEC1P41238 236 aaKnown RBP11.93□□□□□ -0.5
RNF43-208ENST00000584437 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 H2BFWTQ7Z2G1 175 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 CORO2AQ92828 525 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 FGF13Q92913 245 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 MS4A6EQ96DS6 147 aa11.93□□□□□ -0.5
RNF43-208ENST00000584437 SLIRPQ9GZT3 109 aaKnown RBP11.93□□□□□ -0.5
RNF43-208ENST00000584437 CD3DP04234 171 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 RBP2P50120 134 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
RNF43-208ENST00000584437 CNEP1R1Q8N9A8 125 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 ACTR3CQ9C0K3 210 aaPredicted RBP11.92□□□□□ -0.5
RNF43-208ENST00000584437 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 ZC3H12DA2A288 527 aaKnown RBP11.92□□□□□ -0.5
RNF43-208ENST00000584437 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
RNF43-208ENST00000584437 KLKB1P03952 638 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 GLAP06280 429 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 CTSLP07711 333 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 OR10A3P58181 314 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 RAB35Q15286 201 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 C9orf135Q5VTT2 229 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 AGBL4Q5VU57 503 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 ANKRD34AQ69YU3 496 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 MUCL1Q96DR8 90 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 SPNP16150 400 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 RAB5AP20339 215 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 PTAFRP25105 342 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 STAC2Q6ZMT1 411 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 RFPL4AA6NLU0 287 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 RFPL4AL1F8VTS6 287 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 SLC2A10O95528 541 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 PTOV1Q86YD1 416 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 GPX8Q8TED1 209 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 NUDT8Q8WV74 236 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 LHX4Q969G2 390 aa11.92□□□□□ -0.5
RNF43-208ENST00000584437 WDFY2Q96P53 400 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms