RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 DOK2O60496 412 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 GCH1P30793 250 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 ZNF718Q3SXZ3 478 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 Q71RC1 249 aaPredicted RBP23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 LRP11Q86VZ4 500 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 GIPC3Q8TF64 312 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 RPRD1BQ9NQG5 326 aaKnown RBP23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 VNN3Q9NY84 501 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 ASH2LQ9UBL3 628 aa23.33■■□□□ 1.33
SMARCD2-210ENST00000584400 ZNF469Q96JG9 3925 aaPredicted RBP23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 IGLV3-9A0A075B6K5 115 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 BHLHE40O14503 412 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 ICMTO60725 284 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 DAOP14920 347 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 ALDH3B1P43353 468 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 HTR5AP47898 357 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 LOXL1Q08397 574 aaPredicted RBP23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 CARTPTQ16568 116 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 SLC36A3Q495N2 470 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 SLC35F1Q5T1Q4 408 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 ZBTB46Q86UZ6 589 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 OR6V1Q8N148 313 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 ZCCHC24Q8N2G6 241 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 MAPK1IP1LQ8NDC0 245 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 SDR9C7Q8NEX9 313 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 C4orf45Q96LM5 186 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 TSSK2Q96PF2 358 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 CADM1Q9BY67 442 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 TAAR3PQ9P1P4 343 aa23.32■■□□□ 1.32
SMARCD2-210ENST00000584400 IGLV1-36A0A0B4J1U3 117 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 E2F6O75461 281 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 MPZL1O95297 269 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 TUBG1P23258 451 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 CD300LDQ6UXZ3 194 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 GJC3Q8NFK1 279 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 OR2T33Q8NG76 320 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 ABHD4Q8TB40 342 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 UBASH3BQ8TF42 649 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 TSSK6Q9BXA6 273 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 TPK1Q9H3S4 243 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 TUBG2Q9NRH3 451 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 ATPIF1Q9UII2 106 aa23.31■■□□□ 1.32
SMARCD2-210ENST00000584400 VPS13CQ709C8 3753 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 TCRBV3S1A0A5B6 114 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 OR6C68A6NDL8 312 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 H3BSA7 217 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 DCTN6O00399 190 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 WNT5AP41221 380 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 ERVS71-1P61550 626 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 VASH1Q7L8A9 365 aaPredicted RBP23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 ZNF101Q8IZC7 436 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 LNX2Q8N448 690 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 OR2T4Q8NH00 348 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 COG8Q96MW5 612 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 CDADC1Q9BWV3 514 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 TBCCD1Q9NVR7 557 aa23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 MYEF2Q9P2K5 600 aaKnown RBP23.3■■□□□ 1.32
SMARCD2-210ENST00000584400 ABHD16AO95870 558 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 HLA-DQA2P01906 255 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 GAAP10253 952 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 USF1P22415 310 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 CBX1P83916 185 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 PPP2R2BQ00005 443 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 MAD2L1BPQ15013 274 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 TMEM154Q6P9G4 183 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 ZNF786Q8N393 782 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 NPEPL1Q8NDH3 523 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 TEX47Q8TBZ9 253 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 IPCEF1Q8WWN9 437 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 FEVQ99581 238 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 PLA2G12AQ9BZM1 189 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 ZNF556Q9HAH1 456 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 KLHL21Q9UJP4 597 aa23.29■■□□□ 1.32
SMARCD2-210ENST00000584400 ACANP16112 2415 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 FKBP6O75344 327 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 CLPTM1O96005 669 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 IFNGP01579 166 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 IGHV3-13P01766 116 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 IGFBP1P08833 259 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 NR4A2P43354 598 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 PPP1CBP62140 327 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 TEKQ02763 1124 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 PCGF3Q3KNV8 242 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 MBNL2Q5VZF2 373 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 PAPD5Q8NDF8 572 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 SLC26A10Q8NG04 563 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 OR2AJ1Q8NGZ0 328 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 OR1F12Q8NHA8 337 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 SLC25A40Q8TBP6 338 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 DCLRE1CQ96SD1 692 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 HDHD2Q9H0R4 259 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 HINT3Q9NQE9 182 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 PDP1Q9P0J1 537 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 DNAJB9Q9UBS3 223 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 KCNG2Q9UJ96 466 aa23.28■■□□□ 1.32
SMARCD2-210ENST00000584400 OR6C6A6NF89 314 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 VWC2LB2RUY7 222 aa23.27■■□□□ 1.32
SMARCD2-210ENST00000584400 NAT2P11245 290 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms