RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 ZNF726P1Q15940 193 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 ZSCAN26Q16670 478 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 RSPO1Q2MKA7 263 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 SOHLH1Q5JUK2 328 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 TMEM220Q6QAJ8 160 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 DUX4L9Q6RFH8 374 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 MBOAT1Q6ZNC8 495 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 Q6ZVH6 145 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 MICU2Q8IYU8 434 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 Q8N976 141 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 ABHD3Q8WU67 409 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 OR2A5Q96R48 311 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 ZYG11BQ9C0D3 744 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 CCNB1IP1Q9NPC3 277 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 MRPL22Q9NWU5 206 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 TRMT112Q9UI30 125 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 ST3GAL6Q9Y274 331 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 CDC42BPBQ9Y5S2 1711 aa2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 MN1Q10571 1320 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-209ENST00000583441 GTF3C1Q12789 2109 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 IGLV1-50A0A075B6I6 118 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 KCNE1BA0A087WTH5 132 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 A6NDN8 102 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 C11orf94C9JXX5 98 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 SMKR1H3BMG3 65 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 MAGEB4O15481 346 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 SNAI2O43623 268 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 CTAG2O75638 210 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 ARG1P05089 322 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 OR8G3PP0DMU2 310 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 OR5H8P0DN80 308 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 CSNK1A1P48729 337 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 PPOXP50336 477 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 ZNF138P52744 262 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 EIF4EBP2Q13542 120 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 NCF4Q15080 339 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 IRF4Q15306 451 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 CHRFAM7AQ494W8 412 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 PTPN20Q4JDL3 420 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 STUMQ69YW2 141 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 OR52W1Q6IF63 320 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 ANGPTL8Q6UXH0 198 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 OTUD6AQ7L8S5 288 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 OFCC1Q8IZS5 231 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 PQLC3Q8N755 202 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 OR9G4Q8NGQ1 327 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 MRGPRFQ96AM1 343 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 TM4SF18Q96CE8 201 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 ECHDC3Q96DC8 303 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 JSRP1Q96MG2 331 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 BPIFA3Q9BQP9 254 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 CHAC1Q9BUX1 264 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 ACTR3CQ9C0K3 210 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 NEUROG2Q9H2A3 272 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 VCXQ9H320 206 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 ELOVL6Q9H5J4 265 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 RABL2AQ9UBK7 228 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 CTSFQ9UBX1 484 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 PSG8Q9UQ74 426 aa2.35□□□□□ -2.03
SMCHD1-209ENST00000583441 M0R3G1 203 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 AIREO43918 545 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 CDC40O60508 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 DNAJB6O75190 326 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 MED6O75586 246 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 CCNB2O95067 398 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 PRB2P02812 416 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 ASGR1P07306 291 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 IGHV1-8P0DP01 117 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 PRPS2P11908 318 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 MAGP20916 626 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 PFN3P60673 137 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 CDH17Q12864 832 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 DEFB116Q30KQ4 102 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 C1orf185Q5T7R7 199 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 ARL9Q6T311 187 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 APRG1Q8IVJ8 170 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 KATNAL2Q8IYT4 538 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 FAM86B1Q8N7N1 296 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 CHST4Q8NCG5 386 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 BPIFCQ8NFQ6 507 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 NUBPLQ8TB37 319 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 EEF1AKMT3Q96AZ1 226 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 PRRC1Q96M27 445 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 ZNF285Q96NJ3 590 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 ANKRD60Q9BZ19 345 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 SYNDIG1Q9H7V2 258 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 HMG20AQ9NP66 347 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 TBC1D24Q9ULP9 559 aa2.34□□□□□ -2.03
SMCHD1-209ENST00000583441 INSRP06213 1382 aa2.34□□□□□ -2.04
SMCHD1-209ENST00000583441 COL22A1Q8NFW1 1626 aaPredicted RBP2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 TRAV25A0A0B4J276 109 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 IGHV5-10-1A0A0J9YXX1 117 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 OR6C74A6NCV1 312 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 GOLGA8TH3BQL2 631 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 RP2O75695 350 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 LSM8O95777 96 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 HLA-HP01893 362 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 HBE1P02100 147 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 BCHEP06276 602 aa2.33□□□□□ -2.04
SMCHD1-209ENST00000583441 ERGP11308 486 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms