RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ZNF691Q5VV52 312 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 SLC18B1Q6NT16 456 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 TMEM108Q6UXF1 575 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 LINC00346Q8IVM7 164 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 GID4Q8IVV7 300 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 CPEB3Q8NE35 698 aaKnown RBP13.11□□□□□ -0.31
MKS1-210ENST00000581180 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 TFAP2CQ92754 450 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 ZNF582Q96NG8 517 aaPredicted RBP13.11□□□□□ -0.31
MKS1-210ENST00000581180 INTS14Q96SY0 518 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 VCX3BQ9H321 246 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 ESRP2Q9H6T0 727 aaKnown RBP13.11□□□□□ -0.31
MKS1-210ENST00000581180 RASSF1Q9NS23 344 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 DNAJC27Q9NZQ0 273 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 AASSQ9UDR5 926 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 CELSR2Q9HCU4 2923 aa13.11□□□□□ -0.31
MKS1-210ENST00000581180 ZNF593O00488 134 aaPredicted RBP13.1□□□□□ -0.31
MKS1-210ENST00000581180 RER1O15258 196 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 MPZL2O60487 215 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 HTR1FP30939 366 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 RPS27P42677 84 aaKnown RBP13.1□□□□□ -0.31
MKS1-210ENST00000581180 RPS7P62081 194 aaKnown RBP13.1□□□□□ -0.31
MKS1-210ENST00000581180 NAAAQ02083 359 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 TLE4Q04727 773 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 SPOCK1Q08629 439 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 GGTLC2Q14390 218 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 LCN1P1Q5VSP4 162 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 CORO6Q6QEF8 472 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 USP51Q70EK9 711 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 ERI1Q8IV48 349 aaKnown RBP13.1□□□□□ -0.31
MKS1-210ENST00000581180 GJC3Q8NFK1 279 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 APOL4Q9BPW4 351 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 HAO2Q9NYQ3 351 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 H2AFY2Q9P0M6 372 aaPredicted RBP13.1□□□□□ -0.31
MKS1-210ENST00000581180 GDF2Q9UK05 429 aaPredicted RBP13.1□□□□□ -0.31
MKS1-210ENST00000581180 POLR1DQ9Y2S0 133 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 ARFGEF3Q5TH69 2177 aa13.1□□□□□ -0.31
MKS1-210ENST00000581180 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 SLC22A31A6NKX4 558 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 SHISA9B4DS77 424 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 ABCD4O14678 606 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 SGCEO43556 437 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 SYNGR3O43761 229 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 SELENOFO60613 162 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 ENTPD6O75354 484 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
MKS1-210ENST00000581180 PLAUP00749 431 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 CD3EP07766 207 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 COX5BP10606 129 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 ZNF35P13682 527 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 APEX1P27695 318 aaKnown RBP13.09□□□□□ -0.31
MKS1-210ENST00000581180 CALCRP30988 508 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 VHLP40337 213 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 CDH11P55287 796 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 PLP2Q04941 152 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 TMED1Q13445 227 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 IL18R1Q13478 541 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
MKS1-210ENST00000581180 MEDAGQ5VYS4 303 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 CFAP77Q6ZQR2 320 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 VASH1Q7L8A9 365 aaPredicted RBP13.09□□□□□ -0.31
MKS1-210ENST00000581180 DPY19L4Q7Z388 723 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 IL17RDQ8NFM7 739 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 APH1BQ8WW43 257 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 MAP6Q96JE9 813 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 POM121L2Q96KW2 1035 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 C1orf198Q9H425 327 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 PNRC2Q9NPJ4 139 aaKnown RBP13.09□□□□□ -0.31
MKS1-210ENST00000581180 WARS2Q9UGM6 360 aaKnown RBP13.09□□□□□ -0.31
MKS1-210ENST00000581180 RNF115Q9Y4L5 304 aa13.09□□□□□ -0.31
MKS1-210ENST00000581180 ABCA12Q86UK0 2595 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 LOC100509620A0A075B734 347 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 IQCMA0A1B0GVH7 501 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 OR6C6A6NF89 314 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 DOK2O60496 412 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 WBP4O75554 376 aaKnown RBP13.08□□□□□ -0.32
MKS1-210ENST00000581180 PTHP01270 115 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 GNAO1P09471 354 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 SPARCP09486 303 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 PRF1P14222 555 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 SSTR2P30874 369 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 ISL1P61371 349 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 RAB35Q15286 201 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 IZUMO2Q6UXV1 221 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 ZNF704Q6ZNC4 412 aaPredicted RBP13.08□□□□□ -0.32
MKS1-210ENST00000581180 SHFQ7M4L6 423 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 SLC16A9Q7RTY1 509 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 ALDH16A1Q8IZ83 802 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 SLC30A7Q8NEW0 376 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 OR2AJ1Q8NGZ0 328 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.32
MKS1-210ENST00000581180 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 RADILQ96JH8 1075 aa13.08□□□□□ -0.32
MKS1-210ENST00000581180 ADGRL4Q9HBW9 690 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms