RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ZNF841	Q6ZN19	808 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	CCDC121	Q6ZUS5	278 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	GPRIN3	Q6ZVF9	776 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	SLC16A14	Q7RTX9	510 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	UEVLD	Q8IX04	471 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	KLHL7	Q8IXQ5	586 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	CMTM4	Q8IZR5	234 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	LINC00482	Q8N8I6	264 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	RBM15B	Q8NDT2	890 aa	Known RBP	4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	BEND2	Q8NDZ0	799 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	OR51D1	Q8NGF3	324 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	OR51G2	Q8NGK0	314 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	IL17D	Q8TAD2	202 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	FGFBP3	Q8TAT2	258 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	ADAMTS16	Q8TE57	1224 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	MAEL	Q96JY0	434 aa	Known RBP	4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	PRR25	Q96S07	402 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	EMC6	Q9BV81	110 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	PTDSS2	Q9BVG9	487 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	PRSS22	Q9GZN4	317 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	MYLK2	Q9H1R3	596 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	KCNN2	Q9H2S1	579 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	ELOVL3	Q9HB03	270 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	TBCCD1	Q9NVR7	557 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	ATP6V1H	Q9UI12	483 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	STK38L	Q9Y2H1	464 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	WDR45	Q9Y484	360 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	KPTN	Q9Y664	436 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	SORL1	Q92673	2214 aa		4.85	□□□□□ -1.63
KPNB1-209	ENST00000580158	LOC102725191	A0A1B0GVB3	256 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158		A0A1W2PRD5	423 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158		A0A1W2PRF3	423 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158		A0A1W2PRM7	423 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ELOVL7	A1L3X0	281 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CFAP73	A6NFT4	308 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CFLAR	O15519	480 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	BCAS1	O75363	584 aa	Predicted RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	TUSC2	O75896	110 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ECD	O95905	644 aa	Predicted RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	AGR2	O95994	175 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ENO1	P06733	434 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	STOM	P27105	288 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	RPS5	P46782	204 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CSNK1A1	P48729	337 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	SRP9	P49458	86 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	GDI2	P50395	445 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	RPL11	P62913	178 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	HPCA	P84074	193 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	GNA13	Q14344	377 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	HABP2	Q14520	560 aa	Predicted RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	SMU1	Q2TAY7	513 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	LRRC75B	Q2VPJ9	315 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CT83	Q5H943	113 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	TMEM255A	Q5JRV8	349 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	KHDC1L	Q5JSQ8	128 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	MROH9	Q5TGP6	573 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	FAM219B	Q5XKK7	198 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	AP1AR	Q63HQ0	302 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ARL9	Q6T311	187 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	C3orf62	Q6ZUJ4	267 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CYS1	Q717R9	158 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	PIGW	Q7Z7B1	504 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	IGFN1	Q86VF2	1251 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158		Q8N2B8	174 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CADM2	Q8N3J6	435 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ATG16L2	Q8NAA4	619 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	SFXN5	Q8TD22	340 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	WIPF2	Q8TF74	440 aa	Predicted RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	CNOT9	Q92600	299 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	TUBGCP3	Q96CW5	907 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	MTERF3	Q96E29	417 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	METTL2A	Q96IZ6	378 aa	Known RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	SH3GL3	Q99963	347 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	DESI2	Q9BSY9	194 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	DPY30	Q9C005	99 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ZNF350	Q9GZX5	532 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	ZNF702P	Q9H963	129 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	RRAGD	Q9NQL2	400 aa	Predicted RBP	4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	POLE3	Q9NRF9	147 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	B3GAT1	Q9P2W7	334 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	GTF2A1L	Q9UNN4	478 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	TIMM22	Q9Y584	194 aa		4.84	□□□□□ -1.63
KPNB1-209	ENST00000580158	TCRBV9S1A1T	A0A576	114 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	C5orf49	A4QMS7	147 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	FAM159B	A6NKW6	160 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	CLDN24	A6NM45	220 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158		E7ESA3	106 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	OR2T1	O43869	369 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	FZD7	O75084	574 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	LY6G6C	O95867	125 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	GUSB	P08236	651 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	CLEC2L	P0C7M8	214 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	NQO1	P15559	274 aa	Known RBP	4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	NCF2	P19878	526 aa	Predicted RBP	4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	GSTM3	P21266	225 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	SAA4	P35542	130 aa		4.83	□□□□□ -1.64
KPNB1-209	ENST00000580158	RPL3	P39023	403 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms