RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RENP00797 406 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 ERCC1P07992 297 aaPredicted RBP13.76□□□□□ -0.21
VAPA-204ENST00000577901 DAOP14920 347 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 ZNF32P17041 273 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 GIFP27352 417 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 CRABP1P29762 137 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 APLNRP35414 380 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 CDKN2AP42771 156 aaKnown RBP13.76□□□□□ -0.21
VAPA-204ENST00000577901 CHN2P52757 468 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 PABPC1L2AQ5JQF8 200 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 SYT9Q86SS6 491 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 GLB1L2Q8IW92 636 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 OR10G2Q8NGC3 310 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 NEU4Q8WWR8 484 aaPredicted RBP13.76□□□□□ -0.21
VAPA-204ENST00000577901 EGLN3Q9H6Z9 239 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 POLE4Q9NR33 117 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 VNN3Q9NY84 501 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 CMAHPQ9Y471 501 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 CDH10Q9Y6N8 788 aa13.76□□□□□ -0.21
VAPA-204ENST00000577901 TCRBV3S1A0A5B6 114 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 TCF21O43680 179 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 TACSTD2P09758 323 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 CTLA4P16410 223 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 APEX1P27695 318 aaKnown RBP13.75□□□□□ -0.21
VAPA-204ENST00000577901 GLRXP35754 106 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 ARHGDIAP52565 204 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 RPS23P62266 143 aaKnown RBP13.75□□□□□ -0.21
VAPA-204ENST00000577901 CBX1P83916 185 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 COX10Q12887 443 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 LEG1Q6P5S2 330 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 PTCHD4Q6ZW05 846 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 RFLNBQ8N5W9 214 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 OR4K13Q8NH42 304 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 GIPC3Q8TF64 312 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 SNX18Q96RF0 628 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 NMNAT3Q96T66 252 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 DOK1Q99704 481 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 DGCR6LQ9BY27 220 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 NUAK2Q9H093 628 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 IL20Q9NYY1 176 aa13.75□□□□□ -0.21
VAPA-204ENST00000577901 COA3Q9Y2R0 106 aaPredicted RBP13.75□□□□□ -0.21
VAPA-204ENST00000577901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.74□□□□□ -0.211e-14■■■□□ 18.8
VAPA-204ENST00000577901 ARRDC5A6NEK1 342 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 FKBP6O75344 327 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 E2F6O75461 281 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 SNAP29O95721 258 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 CCL2P13500 99 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 HIST1H1CP16403 213 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 CCNOP22674 350 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 STOMP27105 288 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 IL2RGP31785 369 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 SRP14P37108 136 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 RAD52P43351 418 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 CENPAP49450 140 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 PSG4Q00888 419 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 ZCCHC24Q8N2G6 241 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 SVOPLQ8N434 492 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 LINC01356Q8N9X3 169 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 PAPD5Q8NDF8 572 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 CPEB3Q8NE35 698 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 HPS1Q92902 700 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 C1orf159Q96HA4 380 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 ZNF416Q9BWM5 594 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 OR2H1Q9GZK4 316 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 SRA1Q9HD15 236 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 EIF3KQ9UBQ5 218 aaKnown RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 DNAJB9Q9UBS3 223 aa13.74□□□□□ -0.21
VAPA-204ENST00000577901 TMEFF2Q9UIK5 374 aaPredicted RBP13.74□□□□□ -0.21
VAPA-204ENST00000577901 LILRA1O75019 489 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 EVX1P49640 407 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 GDI2P50395 445 aaKnown RBP13.73□□□□□ -0.21
VAPA-204ENST00000577901 ERFP50548 548 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 LSM6P62312 80 aaKnown RBP13.73□□□□□ -0.21
VAPA-204ENST00000577901 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■■□□ 19
VAPA-204ENST00000577901 SCRN3Q0VDG4 424 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 ENDOGQ14249 297 aaKnown RBP13.73□□□□□ -0.21
VAPA-204ENST00000577901 SLC35F1Q5T1Q4 408 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 UGT2A3Q6UWM9 527 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 UNQ6126/PRO20091Q6UXV3 157 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 CD300LDQ6UXZ3 194 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 CCDC121Q6ZUS5 278 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 AKR7LQ8NHP1 331 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 FEVQ99581 238 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 EMC7Q9NPA0 242 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
VAPA-204ENST00000577901 B9D1Q9UPM9 204 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 BAIAP2Q9UQB8 552 aa13.73□□□□□ -0.21
VAPA-204ENST00000577901 TMEM129A0AVI4 362 aa13.72□□□□□ -0.21
VAPA-204ENST00000577901 C5orf49A4QMS7 147 aa13.72□□□□□ -0.21
VAPA-204ENST00000577901 BHLHE40O14503 412 aa13.72□□□□□ -0.21
VAPA-204ENST00000577901 CIB2O75838 187 aa13.72□□□□□ -0.21
VAPA-204ENST00000577901 SCG5P05408 212 aa13.72□□□□□ -0.21
VAPA-204ENST00000577901 FAM157BP0CG42 384 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms