RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CYB561A3Q8NBI2 242 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 SLC37A3Q8NCC5 494 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 OR10G2Q8NGC3 310 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 OR4K13Q8NH42 304 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 IPCEF1Q8WWN9 437 aaPredicted RBP7.42□□□□□ -1.22
SMG6-216ENST00000575176 POM121Q96HA1 1249 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 ERMAPQ96PL5 475 aaPredicted RBP7.42□□□□□ -1.22
SMG6-216ENST00000575176 FEVQ99581 238 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 SYT3Q9BQG1 590 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 SOX7Q9BT81 388 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 C1orf198Q9H425 327 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 BARX1Q9HBU1 254 aaPredicted RBP7.42□□□□□ -1.22
SMG6-216ENST00000575176 ASH2LQ9UBL3 628 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 ATPIF1Q9UII2 106 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 B9D1Q9UPM9 204 aa7.42□□□□□ -1.22
SMG6-216ENST00000575176 DYSFO75923 2080 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 A0A1B0GWJ7 208 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 C5orf63A6NC05 138 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 ZSCAN5BA6NJL1 495 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 E9PQ18 207 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 RER1O15258 196 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 DOK2O60496 412 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 KHDRBS3O75525 346 aaKnown RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 CST1P01037 141 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 IGHV3-13P01766 116 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 HPXP02790 462 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 DBHP09172 617 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 COX5BP10606 129 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 CLUP10909 449 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 GIFP27352 417 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 OTX1P32242 354 aaPredicted RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 RBMXP38159 391 aaKnown RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 ALDH3B1P43353 468 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 NUDT6P53370 316 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 UCP2P55851 309 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMG6-216ENST00000575176 CRMP1Q14194 572 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 TBC1D28Q2M2D7 210 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 SLC36A3Q495N2 470 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 SLC35F1Q5T1Q4 408 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 MBNL2Q5VZF2 373 aaKnown RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 Q6ZR03 302 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 COLCA1Q6ZS62 124 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 RRM2BQ7LG56 351 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 LINC00471Q8N535 108 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 IQCF1Q8N6M8 205 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 YIPF5Q969M3 257 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 TRMT61AQ96FX7 289 aaKnown RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 MAP6Q96JE9 813 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 RBP7Q96R05 134 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 IFT27Q9BW83 186 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 REG4Q9BYZ8 158 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 OR51B6Q9H340 312 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 TPK1Q9H3S4 243 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 REEP1Q9H902 201 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 MARCH7Q9H992 704 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 KRCC1Q9NPI7 259 aaPredicted RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 RPRD1BQ9NQG5 326 aaKnown RBP7.41□□□□□ -1.22
SMG6-216ENST00000575176 CYB5R1Q9UHQ9 305 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 KLHL21Q9UJP4 597 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 TMCC3Q9ULS5 477 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 CMAHPQ9Y471 501 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 FKBP7Q9Y680 259 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 COMMD3-BMI1R4GMX3 469 aa7.41□□□□□ -1.22
SMG6-216ENST00000575176 IGHV4-61A0A0C4DH41 118 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 C5orf49A4QMS7 147 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 FAM171A2A8MVW0 826 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 H3BNX3 289 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 M0R233 179 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 XKRYO14609 159 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 IDH3BO43837 385 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 ENTPD5O75356 428 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 TIPRLO75663 272 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 ADH4P08319 380 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 SLC2A5P22732 501 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 EPHA2P29317 976 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 IL2RGP31785 369 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 PYCR1P32322 319 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 RPS27P42677 84 aaKnown RBP7.4□□□□□ -1.22
SMG6-216ENST00000575176 MAGEB1P43366 347 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 SLC25A1P53007 311 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 RPS23P62266 143 aaKnown RBP7.4□□□□□ -1.22
SMG6-216ENST00000575176 CBX1P83916 185 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 HSF2Q03933 536 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 LOXL1Q08397 574 aaPredicted RBP7.4□□□□□ -1.22
SMG6-216ENST00000575176 RAB35Q15286 201 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 SPATA46Q5T0L3 261 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 ACSM5Q6NUN0 579 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 RPL13AP3Q6NVV1 102 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 SHQ1Q6PI26 577 aaKnown RBP7.4□□□□□ -1.22
SMG6-216ENST00000575176 CORO6Q6QEF8 472 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 Q71RC1 249 aaPredicted RBP7.4□□□□□ -1.22
SMG6-216ENST00000575176 OR52E2Q8NGJ4 325 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 OR9Q1Q8NGQ5 310 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 SLC25A40Q8TBP6 338 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 ST7LQ8TDW4 575 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 POP5Q969H6 163 aaKnown RBP7.4□□□□□ -1.22
SMG6-216ENST00000575176 KCNS3Q9BQ31 491 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 WACQ9BTA9 647 aa7.4□□□□□ -1.22
SMG6-216ENST00000575176 BDH2Q9BUT1 245 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms