RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 ZNF774Q6NX45 483 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 ZNF611Q8N823 705 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 ZNF511Q8NB15 262 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 OR1J2Q8NGS2 313 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 TMEM163Q8TC26 289 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 NRGNQ92686 78 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 ATP23Q9Y6H3 246 aa28.68■■■□□ 2.18
CTDNEP1-209ENST00000574205 ANKRD17O75179 2603 aaKnown RBP28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 DOK2O60496 412 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 CDC42P60953 191 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 B3GLCTQ6Y288 498 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 C20orf204Q6ZNR8 217 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 PACRGLQ8N7B6 248 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 MBOAT4Q96T53 435 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 LIME1Q9H400 295 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 RNPEPL1Q9HAU8 725 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 PLEK2Q9NYT0 353 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 EDARQ9UNE0 448 aa28.67■■■□□ 2.18
CTDNEP1-209ENST00000574205 E9PQ18 207 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 M0R129 80 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 RER1O15258 196 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 COX5BP10606 129 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 SLC2A5P22732 501 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 BBS1Q8NFJ9 593 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 WDR76Q9H967 626 aa28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 SMPD3Q9NY59 655 aaPredicted RBP28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 NKX1-2Q9UD57 310 aaPredicted RBP28.66■■■□□ 2.18
CTDNEP1-209ENST00000574205 CSMD2Q7Z408 3487 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 E7EQL1 145 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 CCL2P13500 99 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 ENTPD1P49961 510 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 HIST1H3AP68431 136 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 SLC34A1Q06495 639 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 OGFRL1Q5TC84 451 aaPredicted RBP28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 HIST2H3PS2Q5TEC6 136 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 SLC18B1Q6NT16 456 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 CORO6Q6QEF8 472 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 PAMR1Q6UXH9 720 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 HIST2H3AQ71DI3 136 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 VASH1Q7L8A9 365 aaPredicted RBP28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 LINC00346Q8IVM7 164 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 GALNT4Q8N4A0 578 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 NUP37Q8NFH4 326 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 OR8J1Q8NGP2 316 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 OR2AJ1Q8NGZ0 328 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 POM121L2Q96KW2 1035 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 IL4I1Q96RQ9 567 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 CDH20Q9HBT6 801 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 NDRG4Q9ULP0 352 aaKnown RBP28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 DSCAMO60469 2012 aa28.65■■■□□ 2.18
CTDNEP1-209ENST00000574205 TMCC2O75069 709 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 GSTT1P30711 240 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 RPS7P62081 194 aaKnown RBP28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 GALK2Q01415 458 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 HGFACQ04756 655 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 PCK2Q16822 640 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 CCDC92Q53HC0 331 aaPredicted RBP28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 TEX30Q5JUR7 227 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 MARCH7Q9H992 704 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 SPEF1Q9Y4P9 236 aa28.64■■■□□ 2.18
CTDNEP1-209ENST00000574205 GDI2P50395 445 aaKnown RBP28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 APOFQ13790 326 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 RAB35Q15286 201 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 NXNL2Q5VZ03 156 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 FAM81AQ8TBF8 368 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 ZMYND19Q96E35 227 aaPredicted RBP28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 INTS14Q96SY0 518 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 DHRS9Q9BPW9 319 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 IMPAD1Q9NX62 359 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 ATPIF1Q9UII2 106 aa28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 GDF2Q9UK05 429 aaPredicted RBP28.64■■■□□ 2.17
CTDNEP1-209ENST00000574205 LOC100509620A0A075B734 347 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 SYNGR3O43761 229 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 NR4A1P22736 598 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 RPS27P42677 84 aaKnown RBP28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 HTR5AP47898 357 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 AADACL4Q5VUY2 407 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 KRT80Q6KB66 452 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 PAQR4Q8N4S7 273 aaPredicted RBP28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 TRUB1Q8WWH5 349 aaKnown RBP28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 PITX2Q99697 317 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 HDHD2Q9H0R4 259 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 CA10Q9NS85 328 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 FAIMQ9NVQ4 179 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 ST6GALNAC2Q9UJ37 374 aa28.63■■■□□ 2.17
CTDNEP1-209ENST00000574205 C5orf49A4QMS7 147 aa28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 ZNF593O00488 134 aaPredicted RBP28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 ELFN2Q5R3F8 820 aa28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 ZNF544Q6NX49 715 aa28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 CFAP77Q6ZQR2 320 aa28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 ERI1Q8IV48 349 aaKnown RBP28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 SMAP2Q8WU79 429 aaPredicted RBP28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 TEAD3Q99594 435 aa28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 H2AFY2Q9P0M6 372 aaPredicted RBP28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 NAV2Q8IVL1 2488 aa28.62■■■□□ 2.17
CTDNEP1-209ENST00000574205 OR6C6A6NF89 314 aa28.61■■■□□ 2.17
CTDNEP1-209ENST00000574205 DLGAP1O14490 977 aa28.61■■■□□ 2.17
CTDNEP1-209ENST00000574205 SPARCP09486 303 aa28.61■■■□□ 2.17
CTDNEP1-209ENST00000574205 CCNOP22674 350 aa28.61■■■□□ 2.17
CTDNEP1-209ENST00000574205 NKX6-1P78426 367 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms