RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LYZL6O75951 148 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 CDKN2AP42771 156 aaKnown RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 CDK5Q00535 292 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 GALEQ14376 348 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 CD300LDQ6UXZ3 194 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 WFDC6Q9BQY6 131 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 SIAEQ9HAT2 523 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ACOXLQ9NUZ1 547 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 QPCTLQ9NXS2 382 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ENPP5Q9UJA9 477 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 GDF2Q9UK05 429 aaPredicted RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 INTS1Q8N201 2190 aaKnown RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 SLC2A2P11168 524 aaPredicted RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 PITPNBP48739 271 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ETV1P50549 477 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 GP2P55259 537 aaKnown RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 RAB1AP62820 205 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MZT1Q08AG7 82 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 SLC22A6Q4U2R8 563 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 KRTCAP3Q53RY4 240 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 ZNF679Q8IYX0 411 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MCHR2Q969V1 340 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MED28Q9H204 178 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 MMP27Q9H306 513 aa9.04□□□□□ -0.96
SMG6-213ENST00000573166 CCDC59Q9P031 241 aaKnown RBP9.04□□□□□ -0.96
SMG6-213ENST00000573166 SNRNP200O75643 2136 aaKnown RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 MYO7BQ6PIF6 2116 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 A0A1W2PR80 420 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 SLC22A23A1A5C7 686 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 PMS2P2O95744 297 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ATP1B3P54709 279 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 GPR50Q13585 617 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ANKRD13BQ86YJ7 626 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ABHD6Q9BV23 337 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 SF3B5Q9BWJ5 86 aaKnown RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 NRIP3Q9NQ35 241 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 TP53TG5Q9Y2B4 290 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 CMAHPQ9Y471 501 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 CHCHD2Q9Y6H1 151 aaPredicted RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 DSPPQ9NZW4 1301 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ACACBO00763 2458 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 AQP7P3A6NL99 342 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ZNF254O75437 659 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 CRTAPO75718 401 aaPredicted RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 PRSS23O95084 383 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 GUSBP08236 651 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 DBHP09172 617 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 FAM157BP0CG42 384 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 UBCP0CG48 685 aaKnown RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 CTLA4P16410 223 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 AKR1D1P51857 326 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 TMEM69Q5SWH9 247 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ZNF684Q5T5D7 378 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 C12orf73Q69YU5 71 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 VASH1Q7L8A9 365 aaPredicted RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 MKXQ8IYA7 352 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 TNFAIP8L1Q8WVP5 186 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 SLC30A2Q9BRI3 323 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 PLCXD1Q9NUJ7 323 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 COL4A3Q01955 1670 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 GABRPO00591 440 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 NME2P1O60361 137 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 NME2P22392 152 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 TNFSF10P50591 281 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 FXNQ16595 210 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 KIF18BQ86Y91 864 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 OR8H1Q8NGG4 311 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 OR6X1Q8NH79 312 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 CHPT1Q8WUD6 406 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 HGDQ93099 445 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 CCDC120Q96HB5 630 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 NEURL2Q9BR09 285 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 GLRX2Q9NS18 164 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 ZNF701Q9NV72 531 aaPredicted RBP9.03□□□□□ -0.96
SMG6-213ENST00000573166 OSGIN2Q9Y236 505 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
SMG6-213ENST00000573166 CCL21O00585 134 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 ATXN7O15265 892 aaPredicted RBP9.02□□□□□ -0.96
SMG6-213ENST00000573166 DNPH1O43598 174 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 RBMXL2O75526 392 aaKnown RBP9.02□□□□□ -0.96
SMG6-213ENST00000573166 CD3GP09693 182 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 SELENOPP49908 381 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 MTCP1P56278 107 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 EIF2S3LQ2VIR3 472 aaKnown RBP9.02□□□□□ -0.96
SMG6-213ENST00000573166 Q499Y3 187 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 UBE2UQ5VVX9 321 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 XAF1Q6GPH4 301 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 WDR88Q6ZMY6 472 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 LIPHQ8WWY8 451 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 FAM46BQ96A09 425 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 FGGYQ96C11 551 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 NUFIP1Q9UHK0 495 aaKnown RBP9.02□□□□□ -0.96
SMG6-213ENST00000573166 V9GY05 133 aa9.02□□□□□ -0.96
SMG6-213ENST00000573166 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.97
SMG6-213ENST00000573166 PLXNA2O75051 1894 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 TMEM129A0AVI4 362 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 A6NIN4 97 aa9.02□□□□□ -0.97
SMG6-213ENST00000573166 HLA-HP01893 362 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms