RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 GAGE12IP0CL82 117 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 LIPCP11150 499 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 EGR2P11161 476 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 SCGB1A1P11684 91 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 MYOD1P15172 320 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 EFNA1P20827 205 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 WARSP23381 471 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 HTR1DP28221 377 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ELK3P41970 407 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ZFP36L2P47974 494 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 SRP9P49458 86 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 HCCSP53701 268 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 HERV-K104P61576 105 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 PAFAH1B2P68402 229 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GAGE1Q13065 139 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GAGE4Q13068 117 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 CRHR2Q13324 411 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 GUSBP1Q15486 140 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 CD226Q15762 336 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM106AQ4KMX7 169 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 SPANXN4Q5MJ08 99 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ATP1A1-AS1Q5TC04 95 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 FNDC7Q5VTL7 733 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 RWDD4Q6NW29 188 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 WDR82Q6UXN9 313 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 CBLL1Q75N03 491 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC36A1Q7Z2H8 476 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM19A1Q7Z5A9 133 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 NIT1Q86X76 327 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 OR6V1Q8N148 313 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 PGBD5Q8N414 524 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 BPIFB2Q8N4F0 458 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 NATD1Q8N6N6 113 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 KLHDC9Q8NEP7 349 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 OR2T12Q8NG77 320 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 COQ8AQ8NI60 647 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 C16orf78Q8WTQ4 265 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 RERGQ96A58 199 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 SFRP2Q96HF1 295 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 RITA1Q96K30 269 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 RBP7Q96R05 134 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 OR8B4Q96RC9 309 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ATF6BQ99941 703 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 AGMATQ9BSE5 352 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF717Q9BY31 904 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 SHARPINQ9H0F6 387 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ALX4Q9H161 411 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 C11orf49Q9H6J7 331 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 TIGARQ9NQ88 270 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 ABCC13Q9NSE7 274 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 TREM2Q9NZC2 230 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 FBXO5Q9UKT4 447 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 OR51B4Q9Y5P0 310 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 METP08581 1390 aa4.27□□□□□ -1.73
TOPBP1-210ENST00000572787 CAMSAP1Q5T5Y3 1602 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TRBV4-1A0A0J9YWV2 114 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 A0A1B0GW55 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SNURFLB1AK76 121 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TSTD3H0UI37 97 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 GFYI3L273 518 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF593O00488 134 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 BET1O15155 118 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 UBDO15205 165 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF749O43361 778 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 XPNPEP2O43895 674 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 PRKYO43930 277 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 CNIH1O95406 144 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TYMSP04818 313 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 HOXD4P09016 255 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L2P0CJ85 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L3P0CJ86 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L4P0CJ87 422 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L5P0CJ88 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L6P0CJ89 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DUX4L7P0CJ90 424 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SERPINA2P20848 420 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 RPS12P25398 132 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 RPA3P35244 121 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 HRH1P35367 487 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TSFMP43897 325 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 OR3A2P47893 321 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 PTH2RP49190 550 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 RASSF2P50749 326 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 CRYBA4P53673 196 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 GAS1P54826 345 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 AQP5P55064 265 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 DLX6P56179 175 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 AP1S2P56377 157 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 RPL8P62917 257 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SP4Q02446 784 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC39A6Q13433 755 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 GTF2H2Q13888 395 aa4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 KIAA0141Q14154 515 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-210ENST00000572787 TFDP2Q14188 446 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms