RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 PUDPQ08623 228 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 MS4A18Q3C1V0 323 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 DHRS7BQ6IAN0 325 aaPredicted RBP9.27□□□□□ -0.93
VPS53-207ENST00000570510 NLRC3Q7RTR2 1065 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 ZER1Q7Z7L7 766 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 POU5F2Q8N7G0 328 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 OR4K5Q8NGD3 323 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 OR10A6Q8NH74 314 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 GATAD2BQ8WXI9 593 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 LRTOMTQ8WZ04 291 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 ARHGDIGQ99819 225 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 NUDT16L1Q9BRJ7 211 aaKnown RBP9.27□□□□□ -0.93
VPS53-207ENST00000570510 TMEM43Q9BTV4 400 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 OR2J1Q9GZK6 312 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 MYLK2Q9H1R3 596 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 DPAGT1Q9H3H5 408 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 NDE1Q9NXR1 346 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 GLTPQ9NZD2 209 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 MIOXQ9UGB7 285 aa9.27□□□□□ -0.93
VPS53-207ENST00000570510 KIR2DS1A0A191URI9 304 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 C5orf49A4QMS7 147 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 CEACAM18A8MTB9 384 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 FAM220BPB1ANY3 271 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 F5H0A9 414 aaPredicted RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 M0QX08 132 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 DCTN3O75935 186 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 HPRP00739 348 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 CD55P08174 381 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 ADH4P08319 380 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 WNT2P09544 360 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 COX4I1P13073 169 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 CPT2P23786 658 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 STOMP27105 288 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 RGS8P57771 180 aaPredicted RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 MTPNP58546 118 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 HOXC5Q00444 222 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 EGR3Q06889 387 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 MTX3Q5HYI7 312 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 RPS26P11Q5JNZ5 115 aaPredicted RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 C8orf82Q6P1X6 216 aaPredicted RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 PXKQ7Z7A4 578 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 PIGWQ7Z7B1 504 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 LRRC18Q8N456 261 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 ZNF283Q8N7M2 679 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 SCCPDHQ8NBX0 429 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 OR2Z1Q8NG97 314 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 OR8B3Q8NGG8 313 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 ABHD4Q8TB40 342 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 SLC25A40Q8TBP6 338 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 KLF14Q8TD94 323 aaPredicted RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 SLC26A7Q8TE54 656 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 ZNF566Q969W8 418 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 MARS2Q96GW9 593 aaKnown RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 SAMD8Q96LT4 415 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 ZNF583Q96ND8 569 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 OR8B2Q96RD0 313 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 TRIM15Q9C019 465 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 CCNB1IP1Q9NPC3 277 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 TMEM38BQ9NVV0 291 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 AURKAIP1Q9NWT8 199 aaPredicted RBP9.26□□□□□ -0.93
VPS53-207ENST00000570510 ARL2BPQ9Y2Y0 163 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 FAM96BQ9Y3D0 163 aa9.26□□□□□ -0.93
VPS53-207ENST00000570510 A0A0B4J2E0 115 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ZNF816-ZNF321PA0A0X1KG74 233 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 LOC100653049A0A140TA62 436 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 A0A1B0GX12 115 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ELOVL7A1L3X0 281 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 C11orf98E9PRG8 122 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 KRT34O76011 436 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 MPIG6BO95866 241 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 MT-ATP6P00846 226 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 IGHV4-59P01825 116 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 SFTPBP07988 381 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ADORA3P0DMS8 318 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 FUT4P22083 530 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 IFNA8P32881 189 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 GDI2P50395 445 aaKnown RBP9.25□□□□□ -0.93
VPS53-207ENST00000570510 ZNF84P51523 738 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ARHGDIAP52565 204 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 HNRNPA0Q13151 305 aaKnown RBP9.25□□□□□ -0.93
VPS53-207ENST00000570510 NRN1LQ496H8 165 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ALG10BQ5I7T1 473 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 DEFB121Q5J5C9 76 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 MBNL2Q5VZF2 373 aaKnown RBP9.25□□□□□ -0.93
VPS53-207ENST00000570510 C11orf87Q6NUJ2 197 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 Q6ZSV7 163 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 KLBQ86Z14 1044 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ZSCAN4Q8NAM6 433 aaPredicted RBP9.25□□□□□ -0.93
VPS53-207ENST00000570510 OR2T12Q8NG77 320 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 LZICQ8WZA0 190 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 NEIL1Q96FI4 390 aaPredicted RBP9.25□□□□□ -0.93
VPS53-207ENST00000570510 ELAC2Q9BQ52 826 aaKnown RBP9.25□□□□□ -0.93
VPS53-207ENST00000570510 ACOXLQ9NUZ1 547 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 ABCD2Q9UBJ2 740 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 CLN8Q9UBY8 286 aa9.25□□□□□ -0.93
VPS53-207ENST00000570510 A0A1B0GWA3 101 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms