RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SYT7O43581 403 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 HSD11B1P28845 292 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 SLC6A9P48067 706 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 ATP1B3P54709 279 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 CDC20BQ86Y33 519 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
USP43-202ENST00000570475 PNPLA2Q96AD5 504 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 ZNF524Q96C55 264 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 ST6GALNAC5Q9BVH7 336 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 CFHR5Q9BXR6 569 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 SLC22A23A1A5C7 686 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 PRSS37A4D1T9 235 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 G3V3Q6 166 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 WISP1O95388 367 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 WNT11O96014 354 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 TLE3Q04726 772 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 CHAF1BQ13112 559 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 DHRS2Q13268 280 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 EID2Q8N6I1 236 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 PARP12Q9H0J9 701 aaKnown RBP13.8□□□□□ -0.2
USP43-202ENST00000570475 CUTCQ9NTM9 273 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 KLRF1Q9NZS2 232 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 KIF25Q9UIL4 384 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 TNFRSF10CO14798 259 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 KNG1P01042 644 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 IL11P20809 199 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 SFTPDP35247 375 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 EPHA4P54764 986 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 TOMM20Q15388 145 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 PAPD4Q6PIY7 484 aaKnown RBP13.8□□□□□ -0.2
USP43-202ENST00000570475 CDH26Q8IXH8 852 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 PHOSPHO2Q8TCD6 241 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 MRI1Q9BV20 369 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
USP43-202ENST00000570475 SLC17A2O00624 439 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 IL5P05113 134 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 OR3A2P47893 321 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 NPY4RP50391 375 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 SCRN3Q0VDG4 424 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 GGTLC2Q14390 218 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 HAGHLQ6PII5 290 aaPredicted RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 FJX1Q86VR8 437 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 GTPBP8Q8N3Z3 284 aaPredicted RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 OR6N1Q8NGY5 312 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 OR8B4Q96RC9 309 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 ACKR4Q9NPB9 350 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 GPN3Q9UHW5 284 aaPredicted RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 MRPS18BQ9Y676 258 aaKnown RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 KNTC1P50748 2209 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 AHCTF1Q8WYP5 2266 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 METTL12A8MUP2 240 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 ZP3P21754 424 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 YPEL5P62699 121 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 AIMP2Q13155 320 aaKnown RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 SERTAD2Q14140 314 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 C1orf140Q5VVS0 124 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 ELSPBP1Q96BH3 223 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 ZNF775Q96BV0 537 aaPredicted RBP13.79□□□□□ -0.2
USP43-202ENST00000570475 EVA1AQ9H8M9 152 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 DZANK1Q9NVP4 752 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 KCNMB2Q9Y691 235 aa13.79□□□□□ -0.2
USP43-202ENST00000570475 TRAV36DV7A0A075B6V5 113 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 ZNF254O75437 659 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 SCGB1D2O95969 90 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 GLI4P10075 376 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 HRH1P35367 487 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 UBE2IP63279 158 aaKnown RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 FZD2Q14332 565 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 PRTGQ2VWP7 1150 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 LANCL3Q6ZV70 420 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 HRH4Q9H3N8 390 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 MBD2Q9UBB5 411 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 OR52A1Q9UKL2 312 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 A6NCN8 305 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 EPOPA6NHQ4 379 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 F8W036 122 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 HOXD4P09016 255 aaPredicted RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 CPN1P15169 458 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 BLOC1S1P78537 153 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 SKP2Q13309 424 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 EEF1A1P5Q5VTE0 462 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 ABHD12BQ7Z5M8 362 aaPredicted RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 SEH1LQ96EE3 360 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 LRRC61Q9BV99 259 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 NMNAT2Q9BZQ4 307 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 PCDHB16Q9NRJ7 776 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 PCOLCE2Q9UKZ9 415 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 SDCBPO00560 298 aaPredicted RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 STK17BO94768 372 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 ERCC1P07992 297 aaPredicted RBP13.78□□□□□ -0.2
USP43-202ENST00000570475 HOXB5P09067 269 aa13.78□□□□□ -0.2
USP43-202ENST00000570475 HSD17B7P56937 341 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms