RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CACNG2Q9Y698 323 aa4.8□□□□□ -1.64
SF3B3-213ENST00000569687 R4GMQ9 66 aa4.8□□□□□ -1.64
SF3B3-213ENST00000569687 SDK1Q7Z5N4 2213 aa4.8□□□□□ -1.64
SF3B3-213ENST00000569687 ZDBF2Q9HCK1 2354 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 WDFY3Q8IZQ1 3526 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TRAV8-7A0A075B6U6 113 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 A0A087WV48 116 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 NSG1A0A0A6YYJ2 146 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 A0A0B4J203 849 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 A0A0B4J293 547 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 C7orf66A4D0T2 115 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ANKRD34BA5PLL1 514 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 NAP1L6A6NFF2 107 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 A6NIN4 97 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 AQP7P3A6NL99 342 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 INMT-MINDY4F8WBC2 141 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SLC17A2O00624 439 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 EEF1E1O43324 174 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 XRCC3O43542 346 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TRAF3IP2O43734 574 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 EIF1BO60739 113 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 CBR3O75828 277 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 MPZL1O95297 269 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ECDO95905 644 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 HPP00738 406 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 IGHG1P01857 330 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SERPINA7P05543 415 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SPARCP09486 303 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF806P0C7X5 589 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 GSTT2BP0CG30 244 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PGA4P0DJD7 388 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PGA3P0DJD8 388 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 CD59P13987 128 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 LIFP15018 202 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF17P17021 662 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 FSTP19883 344 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 LAP3P28838 519 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 BTCP35070 178 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 FOLR3P41439 243 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 MAGEB1P43366 347 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PTH2RP49190 550 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 INPP1P49441 399 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SMCPP49901 116 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 CAPZA1P52907 286 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SUCLG1P53597 346 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 BIDP55957 195 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 RAB25P57735 213 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 RAC1P63000 192 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ADAM8P78325 824 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 POU3F1Q03052 451 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 C19orf57Q0VDD7 668 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TCF15Q12870 199 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SNTB2Q13425 540 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 KLF9Q13886 244 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 EIF2B1Q14232 305 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 MELKQ14680 651 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 CARTPTQ16568 116 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM176BQ3YBM2 270 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 C1orf100Q5SVJ3 147 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 HES5Q5TA89 166 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 RSBN1Q5VWQ0 802 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF57Q68EA5 555 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM225Q6GV28 225 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ANKRD16Q6P6B7 361 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 IL20RBQ6UXL0 311 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 LYPD6Q86Y78 171 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SIAH3Q8IW03 269 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 WDFY1Q8IWB7 410 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 CDH26Q8IXH8 852 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TCTE3Q8IZS6 198 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF433Q8N7K0 673 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SUMF1Q8NBK3 374 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 LGALS14Q8TCE9 139 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ASB5Q8WWX0 329 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 C11orf40Q8WZ69 217 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ATOH1Q92858 354 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM106AQ96A25 262 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SLC25A28Q96A46 364 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 INTS12Q96CB8 462 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SLC25A38Q96DW6 304 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 RNF31Q96EP0 1072 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 LIN37Q96GY3 246 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 C5orf34Q96MH7 638 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ZFP3Q96NJ6 502 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 NAA11Q9BSU3 229 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 COL25A1Q9BXS0 654 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 GPR87Q9BY21 358 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 DPAGT1Q9H3H5 408 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 NIPAL2Q9H841 368 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PLA2G2EQ9NZK7 142 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 NLKQ9UBE8 527 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 STEAP1Q9UHE8 339 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF221Q9UK13 617 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms