RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SLAMF8Q9P0V8 285 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ASH2LQ9UBL3 628 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 IL20RAQ9UHF4 553 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ZDHHC8Q9ULC8 765 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 IQCMA0A1B0GVH7 501 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 FARS2O95363 451 aaKnown RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CH25HO95992 272 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 KITLGP21583 273 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CCNOP22674 350 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 APLNRP35414 380 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 RGS8P57771 180 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 ERVK-25P63136 954 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 LRRC74AQ0VAA2 488 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 ENDOGQ14249 297 aaKnown RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 MOGQ16653 247 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 SLC25A47Q6Q0C1 308 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 LRRN1Q6UXK5 716 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CLDN22Q8N7P3 220 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 ZSCAN4Q8NAM6 433 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CCDC197Q8NCU1 140 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 ELAC2Q9BQ52 826 aaKnown RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 OR2H1Q9GZK4 316 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 EGLN1Q9GZT9 426 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 GCM1Q9NP62 436 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 NOX4Q9NPH5 578 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CYSLTR2Q9NS75 346 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CTSZQ9UBR2 303 aa8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CGGBP1Q9UFW8 167 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-204ENST00000563739 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 PLSCR5A0PG75 271 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 MLNRO43193 412 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 CHP2O43745 196 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 SNX3O60493 162 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 CYB5R3P00387 301 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 IGHG1P01857 330 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 IL6P05231 212 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 CFHR2P36980 270 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 CRYBA2P53672 197 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 PCBP3P57721 371 aaKnown RBP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 HSF2Q03933 536 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 RPL18Q07020 188 aaKnown RBP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 SF3A3Q12874 501 aaKnown RBP eCLIP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 FADDQ13158 208 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF404Q494X3 552 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 FAM205BPQ63HN1 556 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 C11orf87Q6NUJ2 197 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 MSANTD1Q6ZTZ1 278 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 LDLRAD3Q86YD5 345 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 OR6T1Q8NGN1 323 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 MOSPD2Q8NHP6 518 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 OR2V2Q96R30 315 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 NUDT16L1Q9BRJ7 211 aaKnown RBP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 C16orf95Q9H693 158 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 ARMC7Q9H6L4 198 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 SIAEQ9HAT2 523 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-204ENST00000563739 GMEB1Q9Y692 573 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 POMT1Q9Y6A1 747 aa8.59□□□□□ -1.03
SF3B3-204ENST00000563739 A0A0U1RQK1 487 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 A0A1B0GWJ7 208 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 C5orf63A6NC05 138 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 CLIC1O00299 241 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 KPNA4O00629 521 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-204ENST00000563739 RNF13O43567 381 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 PTHP01270 115 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 F13BP05160 661 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 RPS2P15880 293 aaKnown RBP8.58□□□□□ -1.04
SF3B3-204ENST00000563739 RPL15P61313 204 aaKnown RBP8.58□□□□□ -1.04
SF3B3-204ENST00000563739 PLP2Q04941 152 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 DUSP7Q16829 419 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 LRIF1Q5T3J3 769 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 METTL21CQ5VZV1 264 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 WDR25Q64LD2 544 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF620Q6ZNG0 422 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 PTOV1Q86YD1 416 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 FUNDC1Q8IVP5 155 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 C10orf53Q8N6V4 93 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 OR2Z1Q8NG97 314 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 DYRK2Q92630 601 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 MEGF10Q96KG7 1140 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 SIRPDQ9H106 197 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 TCF7L1Q9HCS4 588 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 THUMPD1Q9NXG2 353 aaKnown RBP8.58□□□□□ -1.04
SF3B3-204ENST00000563739 CCDC167Q9P0B6 97 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 IL19Q9UHD0 177 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF229Q9UJW7 825 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 PPP1R3CQ9UQK1 317 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 LYSTQ99698 3801 aa8.58□□□□□ -1.04
SF3B3-204ENST00000563739 IGHV3-64DA0A0J9YX35 117 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 CPSF4LA6NMK7 179 aaKnown RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 CENPBD1B2RD01 187 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 TIMM8AO60220 97 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-204ENST00000563739 FMO6PO60774 539 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 OPN1SWP03999 348 aa8.57□□□□□ -1.04
SF3B3-204ENST00000563739 OPN1MWP04001 364 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms